Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU53704 |
| length | 418 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G39826 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 1910966 ~ 1952906 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006811 | ion transport | biological_process |
| id | description |
|---|---|
| ko05032 | Morphine addiction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53740 | lncRNA | upstream | 19826 | 1857336 ~ 1891140 (+) | True | G39838 |
| TU53702 | lncRNA | upstream | 69317 | 1839503 ~ 1841649 (+) | True | G39825 |
| XR_002649919.1 | lncRNA | upstream | 104025 | 1803667 ~ 1806941 (+) | True | LOC111192496 |
| XR_002649916.1 | lncRNA | upstream | 183311 | 1727164 ~ 1727655 (+) | True | LOC111192493 |
| TU53682 | lncRNA | upstream | 189036 | 1719869 ~ 1721930 (+) | True | G39816 |
| TU53868 | lncRNA | downstream | 69277 | 2022183 ~ 2022598 (+) | True | G39914 |
| TU53876 | lncRNA | downstream | 117193 | 2070099 ~ 2078006 (+) | True | G39922 |
| TU53882 | lncRNA | downstream | 176004 | 2128910 ~ 2131518 (+) | False | G39927 |
| TU53881 | lncRNA | downstream | 176359 | 2129265 ~ 2131518 (+) | True | G39927 |
| TU53883 | lncRNA | downstream | 178068 | 2130974 ~ 2131935 (+) | True | G39928 |
| XM_007236235.3 | mRNA | upstream | 39036 | 1865392 ~ 1871930 (+) | False | slc35c1 |
| XM_007236234.3 | mRNA | upstream | 39036 | 1866416 ~ 1871930 (+) | True | slc35c1 |
| XM_022670138.1 | mRNA | upstream | 74582 | 1809602 ~ 1836384 (+) | True | LOC103030943 |
| XM_022670136.1 | mRNA | upstream | 116034 | 1761227 ~ 1794932 (+) | True | muc2 |
| XM_007260240.2 | mRNA | upstream | 204968 | 1700837 ~ 1705998 (+) | True | rplp2 |
| XM_022669490.1 | mRNA | downstream | 165737 | 2118643 ~ 2235758 (+) | True | LOC111192498 |
| XM_007238866.3 | mRNA | downstream | 429147 | 2382053 ~ 2388088 (+) | False | LOC103031990 |
| XM_015602896.2 | mRNA | downstream | 429155 | 2382061 ~ 2388088 (+) | True | LOC103031990 |
| XM_007238867.3 | mRNA | downstream | 439209 | 2392115 ~ 2406388 (+) | True | LOC103032316 |
| XM_022670140.1 | mRNA | downstream | 644786 | 2597692 ~ 2738656 (+) | True | LOC103029230 |
| TU53708 | other | upstream | 124445 | 1783424 ~ 1786521 (+) | False | muc2 |
| TU53709 | other | upstream | 124730 | 1783424 ~ 1786236 (+) | False | muc2 |
| TU53710 | other | upstream | 125873 | 1781482 ~ 1785093 (+) | False | muc2 |
| TU53705 | other | upstream | 126622 | 1783424 ~ 1784344 (+) | False | muc2 |
| TU53707 | other | upstream | 128306 | 1779691 ~ 1782660 (+) | False | muc2 |
| TU53987 | other | downstream | 737061 | 2689967 ~ 2811496 (+) | False | LOC103029230 |
| TU53995 | other | downstream | 782690 | 2735596 ~ 2738217 (+) | False | LOC103029230 |
| TU54378 | other | downstream | 2181604 | 4134510 ~ 4135585 (+) | True | G40318 |
| TU54660 | other | downstream | 3355640 | 5308546 ~ 5310807 (+) | False | snrpa1 |
| TU54910 | other | downstream | 4580459 | 6533365 ~ 6533674 (+) | True | G40756 |
