Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU53881 |
| length | 264 |
| lncRNA type | intronic |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G39927 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 2128910 ~ 2131518 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53876 | lncRNA | upstream | 51259 | 2070099 ~ 2078006 (+) | True | G39922 |
| TU53868 | lncRNA | upstream | 106667 | 2022183 ~ 2022598 (+) | True | G39914 |
| TU53749 | lncRNA | upstream | 159057 | 1928950 ~ 1970208 (+) | True | G39846 |
| TU53884 | lncRNA | downstream | 73005 | 2204523 ~ 2204958 (+) | True | G39929 |
| TU53885 | lncRNA | downstream | 84450 | 2215968 ~ 2216663 (+) | True | G39930 |
| TU53899 | lncRNA | downstream | 245988 | 2377506 ~ 2377822 (+) | True | G39942 |
| TU53904 | lncRNA | downstream | 257520 | 2389038 ~ 2390639 (+) | True | G39945 |
| TU53905 | lncRNA | downstream | 257520 | 2389038 ~ 2389322 (+) | False | G39945 |
| XM_022669489.1 | mRNA | upstream | 180843 | 1882803 ~ 1948422 (+) | False | mapk8ip1 |
| XM_007236233.3 | mRNA | upstream | 180843 | 1898928 ~ 1948422 (+) | True | mapk8ip1 |
| XM_007236235.3 | mRNA | upstream | 257335 | 1865392 ~ 1871930 (+) | False | slc35c1 |
| XM_007236234.3 | mRNA | upstream | 257335 | 1866416 ~ 1871930 (+) | True | slc35c1 |
| XM_022670138.1 | mRNA | upstream | 292881 | 1809602 ~ 1836384 (+) | True | LOC103030943 |
| XM_007238866.3 | mRNA | downstream | 250535 | 2382053 ~ 2388088 (+) | False | LOC103031990 |
| XM_015602896.2 | mRNA | downstream | 250543 | 2382061 ~ 2388088 (+) | True | LOC103031990 |
| XM_007238867.3 | mRNA | downstream | 260597 | 2392115 ~ 2406388 (+) | True | LOC103032316 |
| XM_022670140.1 | mRNA | downstream | 466174 | 2597692 ~ 2738656 (+) | True | LOC103029230 |
| XM_007237229.3 | mRNA | downstream | 669500 | 2801018 ~ 2861383 (+) | True | kiaa1024 |
| TU53708 | other | upstream | 342744 | 1783424 ~ 1786521 (+) | False | muc2 |
| TU53709 | other | upstream | 343029 | 1783424 ~ 1786236 (+) | False | muc2 |
| TU53710 | other | upstream | 344172 | 1781482 ~ 1785093 (+) | False | muc2 |
| TU53705 | other | upstream | 344921 | 1783424 ~ 1784344 (+) | False | muc2 |
| TU53707 | other | upstream | 346605 | 1779691 ~ 1782660 (+) | False | muc2 |
| TU53987 | other | downstream | 558449 | 2689967 ~ 2811496 (+) | False | LOC103029230 |
| TU53995 | other | downstream | 604078 | 2735596 ~ 2738217 (+) | False | LOC103029230 |
| TU54378 | other | downstream | 2002992 | 4134510 ~ 4135585 (+) | True | G40318 |
| TU54660 | other | downstream | 3177028 | 5308546 ~ 5310807 (+) | False | snrpa1 |
| TU54910 | other | downstream | 4401847 | 6533365 ~ 6533674 (+) | True | G40756 |
