Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU53906 |
| length | 332 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G39946 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 2389916 ~ 2391562 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53905 | lncRNA | upstream | 594 | 2389038 ~ 2389322 (+) | False | G39945 |
| TU53899 | lncRNA | upstream | 12094 | 2377506 ~ 2377822 (+) | True | G39942 |
| TU53885 | lncRNA | upstream | 173253 | 2215968 ~ 2216663 (+) | True | G39930 |
| TU53884 | lncRNA | upstream | 184958 | 2204523 ~ 2204958 (+) | True | G39929 |
| TU53883 | lncRNA | upstream | 257981 | 2130974 ~ 2131935 (+) | True | G39928 |
| TU53913 | lncRNA | downstream | 23210 | 2414772 ~ 2419056 (+) | True | G39952 |
| TU53902 | lncRNA | downstream | 27588 | 2419150 ~ 2425105 (+) | True | G39943 |
| TU53934 | lncRNA | downstream | 107307 | 2498869 ~ 2499291 (+) | True | G39965 |
| TU53999 | lncRNA | downstream | 400972 | 2792534 ~ 2793711 (+) | False | LOC111192560 |
| XR_002650014.1 | lncRNA | downstream | 400978 | 2792540 ~ 2793815 (+) | True | LOC111192560 |
| XM_007238866.3 | mRNA | upstream | 1828 | 2382053 ~ 2388088 (+) | False | LOC103031990 |
| XM_015602896.2 | mRNA | upstream | 1828 | 2382061 ~ 2388088 (+) | True | LOC103031990 |
| XM_022669490.1 | mRNA | upstream | 154158 | 2118643 ~ 2235758 (+) | True | LOC111192498 |
| XM_022669489.1 | mRNA | upstream | 441494 | 1882803 ~ 1948422 (+) | False | mapk8ip1 |
| XM_007238867.3 | mRNA | downstream | 553 | 2392115 ~ 2406388 (+) | True | LOC103032316 |
| XM_022670140.1 | mRNA | downstream | 206130 | 2597692 ~ 2738656 (+) | True | LOC103029230 |
| XM_007237229.3 | mRNA | downstream | 409456 | 2801018 ~ 2861383 (+) | True | kiaa1024 |
| XM_022669496.1 | mRNA | downstream | 594803 | 2986365 ~ 3006325 (+) | True | zfand6 |
| XM_022669497.1 | mRNA | downstream | 594804 | 2986366 ~ 3006325 (+) | False | zfand6 |
| TU53708 | other | upstream | 603395 | 1783424 ~ 1786521 (+) | False | muc2 |
| TU53709 | other | upstream | 603680 | 1783424 ~ 1786236 (+) | False | muc2 |
| TU53710 | other | upstream | 604823 | 1781482 ~ 1785093 (+) | False | muc2 |
| TU53705 | other | upstream | 605572 | 1783424 ~ 1784344 (+) | False | muc2 |
| TU53707 | other | upstream | 607256 | 1779691 ~ 1782660 (+) | False | muc2 |
| TU53987 | other | downstream | 298405 | 2689967 ~ 2811496 (+) | False | LOC103029230 |
| TU53995 | other | downstream | 344034 | 2735596 ~ 2738217 (+) | False | LOC103029230 |
| TU54378 | other | downstream | 1742948 | 4134510 ~ 4135585 (+) | True | G40318 |
| TU54660 | other | downstream | 2916984 | 5308546 ~ 5310807 (+) | False | snrpa1 |
| TU54910 | other | downstream | 4141803 | 6533365 ~ 6533674 (+) | True | G40756 |
