Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU54214 |
| length | 560 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G40186 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 3654800 ~ 3655382 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU54129 | lncRNA | upstream | 167627 | 3399516 ~ 3487173 (+) | True | G40112 |
| TU54152 | lncRNA | upstream | 214188 | 3439890 ~ 3440612 (+) | True | G40127 |
| TU54131 | lncRNA | upstream | 227313 | 3383312 ~ 3427487 (+) | True | G40113 |
| TU54128 | lncRNA | upstream | 252862 | 3382642 ~ 3401938 (+) | True | LOC103025846 |
| TU54107 | lncRNA | upstream | 376503 | 3277679 ~ 3278297 (+) | True | G40093 |
| TU54216 | lncRNA | downstream | 328 | 3655710 ~ 3657053 (+) | True | G40187 |
| TU54213 | lncRNA | downstream | 6318 | 3661700 ~ 3683184 (+) | False | tlnrd1 |
| TU54233 | lncRNA | downstream | 104779 | 3760161 ~ 3763427 (+) | True | G40194 |
| TU54322 | lncRNA | downstream | 182216 | 3837598 ~ 3837861 (+) | False | LOC103044341 |
| TU54326 | lncRNA | downstream | 220041 | 3875423 ~ 3875630 (+) | True | G40274 |
| XM_022669508.1 | mRNA | upstream | 9112 | 3429482 ~ 3645688 (+) | True | cemip |
| XM_022669509.1 | mRNA | upstream | 9112 | 3429482 ~ 3645688 (+) | False | cemip |
| XM_022670141.1 | mRNA | upstream | 255486 | 3382679 ~ 3399314 (+) | False | LOC103025846 |
| XM_022669504.1 | mRNA | upstream | 377187 | 3122592 ~ 3277613 (+) | False | arnt2 |
| XM_007258148.3 | mRNA | downstream | 6293 | 3661675 ~ 3665106 (+) | True | tlnrd1 |
| XM_022669511.1 | mRNA | downstream | 35336 | 3690718 ~ 3750084 (+) | False | il16 |
| XM_007258145.3 | mRNA | downstream | 35337 | 3690719 ~ 3750084 (+) | True | il16 |
| XM_007258147.3 | mRNA | downstream | 35337 | 3690719 ~ 3750084 (+) | False | il16 |
| XM_022669512.1 | mRNA | downstream | 62954 | 3718336 ~ 3750082 (+) | False | il16 |
| TU53987 | other | upstream | 843304 | 2689967 ~ 2811496 (+) | False | LOC103029230 |
| TU53995 | other | upstream | 916583 | 2735596 ~ 2738217 (+) | False | LOC103029230 |
| TU53708 | other | upstream | 1868279 | 1783424 ~ 1786521 (+) | False | muc2 |
| TU53709 | other | upstream | 1868564 | 1783424 ~ 1786236 (+) | False | muc2 |
| TU53710 | other | upstream | 1869707 | 1781482 ~ 1785093 (+) | False | muc2 |
| TU54378 | other | downstream | 479128 | 4134510 ~ 4135585 (+) | True | G40318 |
| TU54660 | other | downstream | 1653164 | 5308546 ~ 5310807 (+) | False | snrpa1 |
| TU54910 | other | downstream | 2877983 | 6533365 ~ 6533674 (+) | True | G40756 |
| XR_001518717.2 | other | downstream | 4171141 | 7826523 ~ 7826914 (+) | True | LOC107197696 |
| TU55733 | other | downstream | 6340371 | 9995753 ~ 10005398 (+) | False | LOC103037553 |
