Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU54353 |
| length | 334 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 3 |
| gene id | G40298 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 3987512 ~ 3988367 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0019538 | protein metabolic process | biological_process |
| GO:0030162 | regulation of proteolysis | biological_process |
| GO:0051246 | regulation of protein metabolic process | biological_process |
| GO:0006508 | proteolysis | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU54347 | lncRNA | upstream | 8399 | 3978885 ~ 3979113 (+) | True | G40294 |
| TU54346 | lncRNA | upstream | 41737 | 3945576 ~ 3945775 (+) | True | G40293 |
| TU54344 | lncRNA | upstream | 53135 | 3934119 ~ 3934377 (+) | True | G40291 |
| TU54340 | lncRNA | upstream | 53920 | 3901056 ~ 3933592 (+) | True | G40287 |
| TU54327 | lncRNA | upstream | 95619 | 3891632 ~ 3891893 (+) | True | G40275 |
| TU54357 | lncRNA | downstream | 8179 | 3996546 ~ 3997000 (+) | True | G40301 |
| TU54358 | lncRNA | downstream | 9838 | 3998205 ~ 3998553 (+) | True | G40302 |
| TU54359 | lncRNA | downstream | 10319 | 3998686 ~ 3998946 (+) | True | G40303 |
| TU54365 | lncRNA | downstream | 67475 | 4055842 ~ 4056370 (+) | True | G40308 |
| TU54384 | lncRNA | downstream | 209192 | 4197559 ~ 4198754 (+) | True | LOC111192499 |
| XM_022670143.1 | mRNA | upstream | 131038 | 3837507 ~ 3856474 (+) | True | LOC103044341 |
| XM_022669511.1 | mRNA | upstream | 237428 | 3690718 ~ 3750084 (+) | False | il16 |
| XM_022669514.1 | mRNA | downstream | 142255 | 4130622 ~ 4394295 (+) | True | LOC103021590 |
| XM_007258141.3 | mRNA | downstream | 446185 | 4434552 ~ 4490598 (+) | True | LOC103022507 |
| XM_007258142.3 | mRNA | downstream | 446185 | 4434552 ~ 4490598 (+) | False | LOC103022507 |
| XM_022669515.1 | mRNA | downstream | 516030 | 4504397 ~ 4515385 (+) | True | LOC103046723 |
| XM_022669518.1 | mRNA | downstream | 546867 | 4535234 ~ 4689998 (+) | False | LOC103028701 |
| TU53987 | other | upstream | 1176016 | 2689967 ~ 2811496 (+) | False | LOC103029230 |
| TU53995 | other | upstream | 1249295 | 2735596 ~ 2738217 (+) | False | LOC103029230 |
| TU53708 | other | upstream | 2200991 | 1783424 ~ 1786521 (+) | False | muc2 |
| TU53709 | other | upstream | 2201276 | 1783424 ~ 1786236 (+) | False | muc2 |
| TU53710 | other | upstream | 2202419 | 1781482 ~ 1785093 (+) | False | muc2 |
| TU54378 | other | downstream | 146143 | 4134510 ~ 4135585 (+) | True | G40318 |
| TU54660 | other | downstream | 1320179 | 5308546 ~ 5310807 (+) | False | snrpa1 |
| TU54910 | other | downstream | 2544998 | 6533365 ~ 6533674 (+) | True | G40756 |
| XR_001518717.2 | other | downstream | 3838156 | 7826523 ~ 7826914 (+) | True | LOC107197696 |
| TU55733 | other | downstream | 6007386 | 9995753 ~ 10005398 (+) | False | LOC103037553 |
