Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU54998 |
| length | 331 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G40842 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 7509178 ~ 7512682 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU54995 | lncRNA | upstream | 13618 | 7495329 ~ 7495560 (+) | True | G40839 |
| TU54994 | lncRNA | upstream | 26076 | 7482758 ~ 7483102 (+) | True | G40838 |
| TU54949 | lncRNA | upstream | 437131 | 7071816 ~ 7072047 (+) | True | G40794 |
| TU54939 | lncRNA | upstream | 510087 | 6954150 ~ 6999091 (+) | True | G40784 |
| TU54938 | lncRNA | upstream | 555613 | 6951786 ~ 6953565 (+) | True | G40783 |
| TU55068 | lncRNA | downstream | 199652 | 7712334 ~ 7712583 (+) | True | G40902 |
| TU55076 | lncRNA | downstream | 275768 | 7788450 ~ 7789606 (+) | True | G40910 |
| TU55082 | lncRNA | downstream | 455434 | 7968116 ~ 7968423 (+) | True | G40916 |
| TU55117 | lncRNA | downstream | 651029 | 8163711 ~ 8164067 (+) | True | G40947 |
| TU55119 | lncRNA | downstream | 652270 | 8164952 ~ 8165271 (+) | True | G40949 |
| XM_007252577.2 | mRNA | upstream | 495391 | 6877772 ~ 7013787 (+) | True | pcdh17 |
| XM_015606694.2 | mRNA | upstream | 495391 | 6877772 ~ 7013787 (+) | False | pcdh17 |
| XM_022669530.1 | mRNA | upstream | 1673091 | 5814515 ~ 5836087 (+) | True | lims1 |
| XM_022669529.1 | mRNA | upstream | 1674092 | 5814514 ~ 5835086 (+) | False | lims1 |
| XM_007252576.3 | mRNA | downstream | 589593 | 8102275 ~ 8162958 (+) | True | xxylt1 |
| XM_022669536.1 | mRNA | downstream | 849155 | 8361837 ~ 8377825 (+) | True | lsg1 |
| XM_022670142.1 | mRNA | downstream | 869574 | 8382256 ~ 8400857 (+) | True | tmem44 |
| XM_022670147.1 | mRNA | downstream | 946833 | 8459515 ~ 8498939 (+) | True | atp13a3 |
| XM_022669537.1 | mRNA | downstream | 999422 | 8512104 ~ 8523308 (+) | True | LOC103028988 |
| TU54910 | other | upstream | 975504 | 6533365 ~ 6533674 (+) | True | G40756 |
| TU54660 | other | upstream | 2198371 | 5308546 ~ 5310807 (+) | False | snrpa1 |
| TU54378 | other | upstream | 3373593 | 4134510 ~ 4135585 (+) | True | G40318 |
| TU53987 | other | upstream | 4697682 | 2689967 ~ 2811496 (+) | False | LOC103029230 |
| XR_001518717.2 | other | downstream | 313841 | 7826523 ~ 7826914 (+) | True | LOC107197696 |
| TU55733 | other | downstream | 2483071 | 9995753 ~ 10005398 (+) | False | LOC103037553 |
| trnar-ucg_1 | other | downstream | 2779655 | 10292337 ~ 10292409 (+) | True | trnar-ucg_1 |
| trnam-cau_21 | other | downstream | 3242527 | 10755209 ~ 10755281 (+) | True | trnam-cau_21 |
| TU56242 | other | downstream | 4058544 | 11571226 ~ 11580329 (+) | True | G41828 |
