Item | Value |
---|---|
RNA id | TU55119 |
length | 320 |
lncRNA type | inter_gene |
GC content | 0.42 |
exon number | 1 |
gene id | G40949 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_035901.1 |
NCBI id | CM008304.1 |
chromosome length | 40584741 |
location | 8164952 ~ 8165271 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
species | mexican tetra (Astyanax mexicanus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU55117 | lncRNA | upstream | 885 | 8163711 ~ 8164067 (+) | True | G40947 |
TU55082 | lncRNA | upstream | 196529 | 7968116 ~ 7968423 (+) | True | G40916 |
TU55076 | lncRNA | upstream | 375346 | 7788450 ~ 7789606 (+) | True | G40910 |
TU55068 | lncRNA | upstream | 452369 | 7712334 ~ 7712583 (+) | True | G40902 |
TU54998 | lncRNA | upstream | 652270 | 7509178 ~ 7512682 (+) | True | G40842 |
TU55120 | lncRNA | downstream | 120 | 8165391 ~ 8165661 (+) | True | G40950 |
TU55122 | lncRNA | downstream | 2508 | 8167779 ~ 8169537 (+) | True | G40952 |
XR_002649927.1 | lncRNA | downstream | 244191 | 8409462 ~ 8454415 (+) | True | LOC111192502 |
TU55147 | lncRNA | downstream | 244379 | 8409650 ~ 8454348 (+) | False | LOC111192502 |
TU55167 | lncRNA | downstream | 334492 | 8499763 ~ 8500064 (+) | True | G40987 |
XM_007252576.3 | mRNA | upstream | 1994 | 8102275 ~ 8162958 (+) | True | xxylt1 |
XM_007252577.2 | mRNA | upstream | 1151165 | 6877772 ~ 7013787 (+) | True | pcdh17 |
XM_015606694.2 | mRNA | upstream | 1151165 | 6877772 ~ 7013787 (+) | False | pcdh17 |
XM_022669530.1 | mRNA | upstream | 2328865 | 5814515 ~ 5836087 (+) | True | lims1 |
XM_022669528.1 | mRNA | upstream | 2331077 | 5814514 ~ 5833875 (+) | False | lims1 |
XM_022669536.1 | mRNA | downstream | 196566 | 8361837 ~ 8377825 (+) | True | lsg1 |
XM_022670142.1 | mRNA | downstream | 216985 | 8382256 ~ 8400857 (+) | True | tmem44 |
XM_022670147.1 | mRNA | downstream | 294244 | 8459515 ~ 8498939 (+) | True | atp13a3 |
XM_022669537.1 | mRNA | downstream | 346833 | 8512104 ~ 8523308 (+) | True | LOC103028988 |
XM_022669538.1 | mRNA | downstream | 386699 | 8551970 ~ 8636478 (+) | True | col6a1 |
XR_001518717.2 | other | upstream | 338038 | 7826523 ~ 7826914 (+) | True | LOC107197696 |
TU54910 | other | upstream | 1631278 | 6533365 ~ 6533674 (+) | True | G40756 |
TU54660 | other | upstream | 2854145 | 5308546 ~ 5310807 (+) | False | snrpa1 |
TU54378 | other | upstream | 4029367 | 4134510 ~ 4135585 (+) | True | G40318 |
TU53995 | other | upstream | 5426735 | 2735596 ~ 2738217 (+) | False | LOC103029230 |
TU55733 | other | downstream | 1830482 | 9995753 ~ 10005398 (+) | False | LOC103037553 |
trnar-ucg_1 | other | downstream | 2127066 | 10292337 ~ 10292409 (+) | True | trnar-ucg_1 |
trnam-cau_21 | other | downstream | 2589938 | 10755209 ~ 10755281 (+) | True | trnam-cau_21 |
TU56242 | other | downstream | 3405955 | 11571226 ~ 11580329 (+) | True | G41828 |
TU56269 | other | downstream | 3589072 | 11754343 ~ 11757209 (+) | False | tmem221 |