Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007252619.3 |
| length | 760 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 5 |
| gene id | atp5d |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 11150635 ~ 11157835 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0015986 | ATP synthesis coupled proton transport | biological_process |
| GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | cellular_component |
| GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | molecular_function |
| GO:0046961 | proton-transporting ATPase activity, rotational mechanism | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU56121 | lncRNA | upstream | 107651 | 11042660 ~ 11043014 (+) | True | G41732 |
| TU56120 | lncRNA | upstream | 115598 | 11034774 ~ 11035067 (+) | True | G41731 |
| TU56060 | lncRNA | upstream | 134588 | 10985208 ~ 11016077 (+) | False | G41686 |
| TU56055 | lncRNA | upstream | 134588 | 11012246 ~ 11016077 (+) | False | G41686 |
| TU56058 | lncRNA | upstream | 161271 | 10985208 ~ 10989394 (+) | True | G41686 |
| TU56204 | lncRNA | downstream | 125402 | 11283237 ~ 11341114 (+) | True | G41802 |
| TU56253 | lncRNA | downstream | 511612 | 11669447 ~ 11709683 (+) | True | tmem161a |
| TU56250 | lncRNA | downstream | 546356 | 11704191 ~ 11709683 (+) | False | tmem161a |
| TU56259 | lncRNA | downstream | 559300 | 11717135 ~ 11718476 (+) | True | G41839 |
| TU56261 | lncRNA | downstream | 562286 | 11720121 ~ 11720995 (+) | True | G41841 |
| XM_007252605.3 | mRNA | upstream | 215783 | 10869622 ~ 10934882 (+) | True | LOC103035556 |
| XM_007252603.3 | mRNA | upstream | 289564 | 10756369 ~ 10861101 (+) | True | LOC103034920 |
| XM_007252600.2 | mRNA | upstream | 407319 | 10733294 ~ 10743346 (+) | True | LOC103033538 |
| XM_022669593.1 | mRNA | upstream | 420276 | 10718740 ~ 10730389 (+) | True | LOC103033216 |
| XM_007237334.3 | mRNA | upstream | 861049 | 10281508 ~ 10289616 (+) | True | psmd14 |
| XM_007252620.3 | mRNA | downstream | 18890 | 11176725 ~ 11201128 (+) | True | LOC103039314 |
| XM_022669595.1 | mRNA | downstream | 208430 | 11366265 ~ 11371720 (+) | False | LOC103039618 |
| XM_007252622.3 | mRNA | downstream | 210201 | 11368036 ~ 11373344 (+) | False | LOC103039618 |
| XM_007252621.3 | mRNA | downstream | 210202 | 11368037 ~ 11371720 (+) | True | LOC103039618 |
| XM_015606706.2 | mRNA | downstream | 539653 | 11697488 ~ 11707969 (+) | False | tmem161a |
| trnam-cau_21 | other | upstream | 395384 | 10755209 ~ 10755281 (+) | True | trnam-cau_21 |
| trnar-ucg_1 | other | upstream | 858256 | 10292337 ~ 10292409 (+) | True | trnar-ucg_1 |
| TU55733 | other | upstream | 1145267 | 9995753 ~ 10005398 (+) | False | LOC103037553 |
| XR_001518717.2 | other | upstream | 3323751 | 7826523 ~ 7826914 (+) | True | LOC107197696 |
| TU54910 | other | upstream | 4616991 | 6533365 ~ 6533674 (+) | True | G40756 |
| TU56242 | other | downstream | 413391 | 11571226 ~ 11580329 (+) | True | G41828 |
| TU56269 | other | downstream | 596508 | 11754343 ~ 11757209 (+) | False | tmem221 |
| trnaa-agc_12 | other | downstream | 955297 | 12113132 ~ 12113204 (+) | True | trnaa-agc_12 |
| XR_002649936.1 | other | downstream | 1176509 | 12334344 ~ 12340885 (+) | True | LOC103047294 |
| XR_002649937.1 | other | downstream | 1178683 | 12336518 ~ 12340885 (+) | False | LOC103047294 |
