Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007260240.2 |
| length | 487 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 5 |
| gene id | rplp2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 1700837 ~ 1705998 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006414 | translational elongation | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02943 | RP-LP2, RPLP2; large subunit ribosomal protein LP2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53546 | lncRNA | upstream | 16372 | 1596420 ~ 1684465 (+) | True | G39718 |
| TU53552 | lncRNA | upstream | 47017 | 1653447 ~ 1653820 (+) | True | G39724 |
| TU53543 | lncRNA | upstream | 110865 | 1589162 ~ 1589972 (+) | True | G39717 |
| TU53544 | lncRNA | upstream | 110865 | 1589162 ~ 1589972 (+) | False | G39717 |
| TU53545 | lncRNA | upstream | 111224 | 1589162 ~ 1589613 (+) | False | G39717 |
| TU53682 | lncRNA | downstream | 13871 | 1719869 ~ 1721930 (+) | True | G39816 |
| XR_002649916.1 | lncRNA | downstream | 21166 | 1727164 ~ 1727655 (+) | True | LOC111192493 |
| XR_002649919.1 | lncRNA | downstream | 97669 | 1803667 ~ 1806941 (+) | True | LOC111192496 |
| TU53702 | lncRNA | downstream | 133505 | 1839503 ~ 1841649 (+) | True | G39825 |
| TU53740 | lncRNA | downstream | 151338 | 1857336 ~ 1891140 (+) | True | G39838 |
| XM_007260235.3 | mRNA | upstream | 255614 | 1440755 ~ 1445223 (+) | True | sdhaf2 |
| XM_015608586.2 | mRNA | upstream | 273720 | 1420391 ~ 1427117 (+) | True | polr2l |
| XM_007260233.3 | mRNA | upstream | 394596 | 1292789 ~ 1306241 (+) | True | LOC103026058 |
| XM_022669483.1 | mRNA | upstream | 432461 | 1265857 ~ 1268376 (+) | True | LOC111192492 |
| XM_022670136.1 | mRNA | downstream | 55229 | 1761227 ~ 1794932 (+) | True | muc2 |
| XM_022670138.1 | mRNA | downstream | 103604 | 1809602 ~ 1836384 (+) | True | LOC103030943 |
| XM_007236235.3 | mRNA | downstream | 159394 | 1865392 ~ 1871930 (+) | False | slc35c1 |
| XM_007236234.3 | mRNA | downstream | 160418 | 1866416 ~ 1871930 (+) | True | slc35c1 |
| XM_022669489.1 | mRNA | downstream | 176805 | 1882803 ~ 1948422 (+) | False | mapk8ip1 |
| TU53498 | other | upstream | 287038 | 1410446 ~ 1413799 (+) | False | LOC111192494 |
| TU53383 | other | upstream | 480351 | 1219806 ~ 1220486 (+) | True | G39626 |
| TU53369 | other | upstream | 491741 | 1206787 ~ 1209096 (+) | True | G39619 |
| XR_455709.3 | other | upstream | 737553 | 922757 ~ 963284 (+) | False | plekho2 |
| XR_002649913.1 | other | upstream | 1409815 | 281585 ~ 291022 (+) | False | commd2 |
| TU53707 | other | downstream | 73693 | 1779691 ~ 1782660 (+) | False | muc2 |
| TU53710 | other | downstream | 75484 | 1781482 ~ 1785093 (+) | False | muc2 |
| TU53705 | other | downstream | 77426 | 1783424 ~ 1784344 (+) | False | muc2 |
| TU53708 | other | downstream | 77426 | 1783424 ~ 1786521 (+) | False | muc2 |
| TU53709 | other | downstream | 77426 | 1783424 ~ 1786236 (+) | False | muc2 |
