Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002649919.1 |
| length | 665 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 3 |
| gene id | LOC111192496 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 1803667 ~ 1806941 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002649916.1 | lncRNA | upstream | 76012 | 1727164 ~ 1727655 (+) | True | LOC111192493 |
| TU53682 | lncRNA | upstream | 81737 | 1719869 ~ 1721930 (+) | True | G39816 |
| TU53546 | lncRNA | upstream | 119202 | 1596420 ~ 1684465 (+) | True | G39718 |
| TU53552 | lncRNA | upstream | 149847 | 1653447 ~ 1653820 (+) | True | G39724 |
| TU53544 | lncRNA | upstream | 213695 | 1589162 ~ 1589972 (+) | False | G39717 |
| TU53702 | lncRNA | downstream | 32562 | 1839503 ~ 1841649 (+) | True | G39825 |
| TU53740 | lncRNA | downstream | 50395 | 1857336 ~ 1891140 (+) | True | G39838 |
| TU53704 | lncRNA | downstream | 104025 | 1910966 ~ 1952906 (+) | True | G39826 |
| TU53749 | lncRNA | downstream | 122009 | 1928950 ~ 1970208 (+) | True | G39846 |
| TU53750 | lncRNA | downstream | 124252 | 1931193 ~ 1932060 (+) | True | G39847 |
| XM_022670136.1 | mRNA | upstream | 8735 | 1761227 ~ 1794932 (+) | True | muc2 |
| XM_007260240.2 | mRNA | upstream | 97669 | 1700837 ~ 1705998 (+) | True | rplp2 |
| XM_007260235.3 | mRNA | upstream | 358444 | 1440755 ~ 1445223 (+) | True | sdhaf2 |
| XM_015608586.2 | mRNA | upstream | 376550 | 1420391 ~ 1427117 (+) | True | polr2l |
| XM_007260233.3 | mRNA | upstream | 497426 | 1292789 ~ 1306241 (+) | True | LOC103026058 |
| XM_022670138.1 | mRNA | downstream | 2661 | 1809602 ~ 1836384 (+) | True | LOC103030943 |
| XM_007236235.3 | mRNA | downstream | 58451 | 1865392 ~ 1871930 (+) | False | slc35c1 |
| XM_007236234.3 | mRNA | downstream | 59475 | 1866416 ~ 1871930 (+) | True | slc35c1 |
| XM_022669489.1 | mRNA | downstream | 75862 | 1882803 ~ 1948422 (+) | False | mapk8ip1 |
| XM_007236233.3 | mRNA | downstream | 91987 | 1898928 ~ 1948422 (+) | True | mapk8ip1 |
| TU53708 | other | upstream | 17146 | 1783424 ~ 1786521 (+) | False | muc2 |
| TU53709 | other | upstream | 17431 | 1783424 ~ 1786236 (+) | False | muc2 |
| TU53710 | other | upstream | 18574 | 1781482 ~ 1785093 (+) | False | muc2 |
| TU53705 | other | upstream | 19323 | 1783424 ~ 1784344 (+) | False | muc2 |
| TU53707 | other | upstream | 21007 | 1779691 ~ 1782660 (+) | False | muc2 |
| TU53987 | other | downstream | 883026 | 2689967 ~ 2811496 (+) | False | LOC103029230 |
| TU53995 | other | downstream | 928655 | 2735596 ~ 2738217 (+) | False | LOC103029230 |
| TU54378 | other | downstream | 2327569 | 4134510 ~ 4135585 (+) | True | G40318 |
| TU54660 | other | downstream | 3501605 | 5308546 ~ 5310807 (+) | False | snrpa1 |
| TU54910 | other | downstream | 4726424 | 6533365 ~ 6533674 (+) | True | G40756 |
