Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002649928.1 |
| length | 1173 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | LOC111192503 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 8770054 ~ 8771261 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU55236 | lncRNA | upstream | 4174 | 8763149 ~ 8765880 (+) | True | G41040 |
| TU55239 | lncRNA | upstream | 27311 | 8718685 ~ 8742743 (+) | False | LOC103027717 |
| TU55172 | lncRNA | upstream | 245741 | 8523281 ~ 8524313 (+) | False | LOC103028988 |
| TU55171 | lncRNA | upstream | 247645 | 8521281 ~ 8522409 (+) | True | G40989 |
| TU55164 | lncRNA | upstream | 258442 | 8504618 ~ 8511612 (+) | False | G40984 |
| TU55319 | lncRNA | downstream | 33723 | 8804984 ~ 8805203 (+) | True | G41087 |
| TU55330 | lncRNA | downstream | 157201 | 8928462 ~ 8935486 (+) | False | LOC103022991 |
| TU55337 | lncRNA | downstream | 166157 | 8937418 ~ 8942071 (+) | True | G41099 |
| TU55334 | lncRNA | downstream | 183542 | 8954803 ~ 8988103 (+) | True | G41097 |
| TU55382 | lncRNA | downstream | 359848 | 9131109 ~ 9163752 (+) | True | G41127 |
| XM_022670148.1 | mRNA | upstream | 7262 | 8718560 ~ 8762792 (+) | True | LOC103027717 |
| XM_022669541.1 | mRNA | upstream | 53312 | 8702442 ~ 8716742 (+) | True | LOC103028050 |
| XM_022669542.1 | mRNA | upstream | 53312 | 8702617 ~ 8716742 (+) | False | LOC103028050 |
| XM_022669539.1 | mRNA | upstream | 68983 | 8661001 ~ 8701071 (+) | True | col6a2 |
| XM_022669540.1 | mRNA | upstream | 76577 | 8660999 ~ 8693477 (+) | False | col6a2 |
| XM_022669548.1 | mRNA | downstream | 56827 | 8828088 ~ 8919744 (+) | True | LOC103026226 |
| XM_007252572.3 | mRNA | downstream | 150667 | 8921928 ~ 8935403 (+) | True | LOC103022991 |
| XM_022669549.1 | mRNA | downstream | 171581 | 8942842 ~ 8986586 (+) | True | LOC103025921 |
| XM_022669551.1 | mRNA | downstream | 171581 | 8942842 ~ 8986586 (+) | False | LOC103025921 |
| XM_022669550.1 | mRNA | downstream | 171581 | 8942842 ~ 8986586 (+) | False | LOC103025921 |
| XR_001518717.2 | other | upstream | 943140 | 7826523 ~ 7826914 (+) | True | LOC107197696 |
| TU54910 | other | upstream | 2236380 | 6533365 ~ 6533674 (+) | True | G40756 |
| TU54660 | other | upstream | 3459247 | 5308546 ~ 5310807 (+) | False | snrpa1 |
| TU54378 | other | upstream | 4634469 | 4134510 ~ 4135585 (+) | True | G40318 |
| TU53995 | other | upstream | 6031837 | 2735596 ~ 2738217 (+) | False | LOC103029230 |
| TU55733 | other | downstream | 1224492 | 9995753 ~ 10005398 (+) | False | LOC103037553 |
| trnar-ucg_1 | other | downstream | 1521076 | 10292337 ~ 10292409 (+) | True | trnar-ucg_1 |
| trnam-cau_21 | other | downstream | 1983948 | 10755209 ~ 10755281 (+) | True | trnam-cau_21 |
| TU56242 | other | downstream | 2799965 | 11571226 ~ 11580329 (+) | True | G41828 |
| TU56269 | other | downstream | 2983082 | 11754343 ~ 11757209 (+) | False | tmem221 |
