Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC107197844 |
| length | 1183 |
| RNA type | C_region |
| GC content | 0.39 |
| exon number | 6 |
| gene id | LOC107197844 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 29071891 ~ 29078898 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU113571 | lncRNA | upstream | 232 | 29046743 ~ 29071659 (+) | True | G84311 |
| TU113575 | lncRNA | upstream | 232 | 29046743 ~ 29071659 (+) | False | G84311 |
| TU113572 | lncRNA | upstream | 232 | 29066923 ~ 29071659 (+) | False | G84311 |
| TU113578 | lncRNA | upstream | 44068 | 29027288 ~ 29027823 (+) | True | G84313 |
| TU113565 | lncRNA | upstream | 53555 | 29012591 ~ 29018336 (+) | True | G84307 |
| TU113690 | lncRNA | downstream | 24833 | 29103731 ~ 29103978 (+) | True | G84402 |
| TU113691 | lncRNA | downstream | 31714 | 29110612 ~ 29112649 (+) | True | G84403 |
| TU113700 | lncRNA | downstream | 81496 | 29160394 ~ 29162367 (+) | True | G84412 |
| TU113702 | lncRNA | downstream | 93908 | 29172806 ~ 29175987 (+) | True | G84414 |
| TU113704 | lncRNA | downstream | 100971 | 29179869 ~ 29185938 (+) | True | G84415 |
| XM_022672486.1 | mRNA | upstream | 102863 | 28854283 ~ 28969028 (+) | True | LOC111193134 |
| XM_007257310.3 | mRNA | upstream | 270652 | 28775149 ~ 28801239 (+) | True | arel1 |
| XM_007257327.2 | mRNA | upstream | 323463 | 28739241 ~ 28748428 (+) | True | LOC103029222 |
| XM_015607893.2 | mRNA | upstream | 396228 | 28662092 ~ 28675663 (+) | True | dlst |
| XM_007257335.3 | mRNA | upstream | 511797 | 28489979 ~ 28560094 (+) | False | esrrb |
| XM_022673123.1 | mRNA | downstream | 108677 | 29187575 ~ 29215673 (+) | True | adi1 |
| XM_007257305.2 | mRNA | downstream | 186155 | 29265053 ~ 29324443 (+) | True | eipr1 |
| XM_022673125.1 | mRNA | downstream | 335614 | 29414512 ~ 29625594 (+) | False | LOC103038403 |
| XM_022673128.1 | mRNA | downstream | 354928 | 29433826 ~ 29610931 (+) | False | LOC103038403 |
| XM_022673129.1 | mRNA | downstream | 354928 | 29433826 ~ 29610931 (+) | False | LOC103038403 |
| LOC111193135 | other | upstream | 28152 | 29043217 ~ 29043739 (+) | True | LOC111193135 |
| LOC111193240 | other | upstream | 30284 | 29040979 ~ 29041607 (+) | True | LOC111193240 |
| TU113562 | other | upstream | 46777 | 29004094 ~ 29025114 (+) | False | LOC103045392 |
| LOC103045392 | other | upstream | 71785 | 28999502 ~ 29000106 (+) | False | LOC103045392 |
| LOC107197841 | other | upstream | 101052 | 28970279 ~ 28970839 (+) | False | LOC107197841 |
| XR_002650381.1 | other | downstream | 2376086 | 31454984 ~ 31462260 (+) | False | pnisr |
| TU114720 | other | downstream | 2744688 | 31823586 ~ 31824388 (+) | True | G85189 |
| XR_002650383.1 | other | downstream | 3120285 | 32199183 ~ 32218762 (+) | True | LOC103035447 |
| XR_002650384.1 | other | downstream | 3120285 | 32199183 ~ 32215147 (+) | False | LOC103035447 |
| XR_002650385.1 | other | downstream | 3120993 | 32199891 ~ 32218762 (+) | False | LOC103035447 |
