Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU104107 |
| length | 569 |
| lncRNA type | intronic |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G77201 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 903418 ~ 903986 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU104106 | lncRNA | upstream | 179 | 903038 ~ 903239 (+) | True | G77200 |
| TU104078 | lncRNA | upstream | 8759 | 815402 ~ 894659 (+) | True | G77181 |
| TU104083 | lncRNA | upstream | 59322 | 815069 ~ 844096 (+) | False | G77181 |
| TU104079 | lncRNA | upstream | 85568 | 807065 ~ 817850 (+) | False | G77181 |
| TU104082 | lncRNA | upstream | 85603 | 786239 ~ 817815 (+) | False | G77181 |
| TU104109 | lncRNA | downstream | 3820 | 907806 ~ 908179 (+) | False | G77203 |
| TU104112 | lncRNA | downstream | 3820 | 907806 ~ 908280 (+) | True | G77203 |
| TU104110 | lncRNA | downstream | 3959 | 907945 ~ 908179 (+) | False | G77203 |
| TU104111 | lncRNA | downstream | 3959 | 907945 ~ 908280 (+) | False | G77203 |
| TU104116 | lncRNA | downstream | 9122 | 913108 ~ 913660 (+) | True | G77207 |
| XM_007255088.3 | mRNA | upstream | 65265 | 834977 ~ 838153 (+) | True | eef1akmt2 |
| XM_022672552.1 | mRNA | upstream | 88728 | 776124 ~ 814690 (+) | True | arhgap5 |
| XM_022672554.1 | mRNA | upstream | 88747 | 776124 ~ 814671 (+) | False | arhgap5 |
| XM_007255087.3 | mRNA | upstream | 88784 | 776124 ~ 814634 (+) | False | arhgap5 |
| XM_022672551.1 | mRNA | upstream | 141695 | 754457 ~ 761723 (+) | False | nubpl |
| XM_022672449.1 | mRNA | downstream | 111847 | 1015833 ~ 1033566 (+) | True | LOC103042422 |
| XM_022672557.1 | mRNA | downstream | 134888 | 1038874 ~ 1179637 (+) | True | adam12 |
| XM_022672558.1 | mRNA | downstream | 134888 | 1038874 ~ 1179637 (+) | False | adam12 |
| XM_022672559.1 | mRNA | downstream | 283134 | 1187120 ~ 1203142 (+) | True | LOC103043042 |
| XM_022672563.1 | mRNA | downstream | 400081 | 1304067 ~ 1318118 (+) | True | LOC107197738 |
| TU104033 | other | upstream | 271046 | 631714 ~ 632372 (+) | True | G77154 |
| TU103901 | other | upstream | 382828 | 519633 ~ 520590 (+) | True | G77059 |
| TU103782 | other | upstream | 770258 | 106902 ~ 133160 (+) | False | ldah |
| TU103781 | other | upstream | 770258 | 126248 ~ 133160 (+) | False | ldah |
| TU103780 | other | upstream | 788055 | 84729 ~ 115363 (+) | False | ldah |
| TU104123 | other | downstream | 101143 | 1005129 ~ 1008842 (+) | True | G77212 |
| TU104376 | other | downstream | 580684 | 1484670 ~ 1485050 (+) | True | G77410 |
| TU104477 | other | downstream | 789370 | 1693356 ~ 1696981 (+) | True | G77471 |
| TU104827 | other | downstream | 1996148 | 2900134 ~ 2978094 (+) | True | G77722 |
| TU104828 | other | downstream | 1996148 | 2900134 ~ 2978094 (+) | False | G77722 |
