Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU105124 |
| length | 776 |
| lncRNA type | sense_over |
| GC content | 0.40 |
| exon number | 2 |
| gene id | g2e3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 3765780 ~ 3824872 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU104988 | lncRNA | upstream | 216165 | 3542252 ~ 3549615 (+) | True | G77847 |
| TU104955 | lncRNA | upstream | 370904 | 3394380 ~ 3394876 (+) | True | G77817 |
| TU104946 | lncRNA | upstream | 406047 | 3322085 ~ 3359733 (+) | False | traf3 |
| TU104928 | lncRNA | upstream | 465109 | 3260466 ~ 3300671 (+) | True | G77804 |
| TU104933 | lncRNA | upstream | 468338 | 3220621 ~ 3297442 (+) | True | G77808 |
| TU105133 | lncRNA | downstream | 92530 | 3916804 ~ 3918653 (+) | False | G77961 |
| TU105134 | lncRNA | downstream | 92530 | 3916804 ~ 3921829 (+) | True | G77961 |
| TU105259 | lncRNA | downstream | 188476 | 4012750 ~ 4013009 (+) | True | G78053 |
| TU105261 | lncRNA | downstream | 207989 | 4032263 ~ 4032562 (+) | True | G78055 |
| TU105263 | lncRNA | downstream | 212040 | 4036314 ~ 4036575 (+) | True | G78057 |
| XM_007257917.3 | mRNA | upstream | 281118 | 3482138 ~ 3484662 (+) | True | foxg1 |
| XM_022672460.1 | mRNA | upstream | 290019 | 3396459 ~ 3475761 (+) | True | LOC103028182 |
| XM_022672606.1 | mRNA | upstream | 372622 | 3365742 ~ 3393158 (+) | True | LOC103028495 |
| XM_022672605.1 | mRNA | upstream | 373121 | 3365742 ~ 3392659 (+) | False | LOC103028495 |
| XM_022672604.1 | mRNA | upstream | 406036 | 3331931 ~ 3359744 (+) | True | traf3 |
| XM_022672610.1 | mRNA | downstream | 1354 | 3825628 ~ 3853124 (+) | True | scfd1 |
| XM_022672611.1 | mRNA | downstream | 29332 | 3853606 ~ 3858455 (+) | True | LOC103022404 |
| XM_007257912.3 | mRNA | downstream | 44279 | 3868553 ~ 3879318 (+) | True | coch |
| XM_007257903.3 | mRNA | downstream | 83624 | 3907898 ~ 3915777 (+) | True | ap4s1 |
| XM_007257898.3 | mRNA | downstream | 183241 | 4007515 ~ 4011258 (+) | True | LOC103044683 |
| trnav-cac_1 | other | upstream | 345781 | 3419927 ~ 3419999 (+) | True | trnav-cac_1 |
| trnav-aac_3 | other | upstream | 348869 | 3416839 ~ 3416911 (+) | True | trnav-aac_3 |
| trnav-aac_2 | other | upstream | 349540 | 3416168 ~ 3416240 (+) | True | trnav-aac_2 |
| TU104827 | other | upstream | 787686 | 2900134 ~ 2978094 (+) | True | G77722 |
| TU105324 | other | downstream | 465233 | 4289507 ~ 4298184 (+) | True | G78111 |
| TU105595 | other | downstream | 1627841 | 5452115 ~ 5527965 (+) | False | LOC103025550 |
| TU105776 | other | downstream | 3033135 | 6857409 ~ 6861157 (+) | False | LOC103024862 |
| TU106040 | other | downstream | 3770433 | 7594707 ~ 7607664 (+) | True | G78671 |
| TU106110 | other | downstream | 3832055 | 7656329 ~ 7670774 (+) | False | fam167b |
