Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU105335 |
| length | 960 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G78117 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 4318054 ~ 4320327 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002650303.1 | lncRNA | upstream | 31823 | 4278111 ~ 4286231 (+) | True | LOC111193172 |
| TU105273 | lncRNA | upstream | 158737 | 4158517 ~ 4159317 (+) | True | G78066 |
| TU105276 | lncRNA | upstream | 160189 | 4154743 ~ 4157865 (+) | True | G78068 |
| TU105267 | lncRNA | upstream | 203678 | 4081395 ~ 4114376 (+) | True | G78060 |
| TU105266 | lncRNA | upstream | 213179 | 4045437 ~ 4104875 (+) | True | G78059 |
| TU105341 | lncRNA | downstream | 31126 | 4351453 ~ 4353277 (+) | True | G78122 |
| TU105402 | lncRNA | downstream | 157539 | 4477866 ~ 4490654 (+) | True | G78172 |
| TU105536 | lncRNA | downstream | 884755 | 5205082 ~ 5207413 (+) | True | G78283 |
| TU105535 | lncRNA | downstream | 972428 | 5292755 ~ 5294206 (+) | True | G78282 |
| TU105673 | lncRNA | downstream | 2236906 | 6557233 ~ 6563936 (+) | False | G78397 |
| XM_007258891.3 | mRNA | upstream | 4266 | 4310317 ~ 4313788 (+) | True | dnaaf2 |
| XM_007258890.3 | mRNA | upstream | 9645 | 4298796 ~ 4308409 (+) | True | klhdc1 |
| XM_007257898.3 | mRNA | upstream | 306796 | 4007515 ~ 4011258 (+) | True | LOC103044683 |
| XM_007257903.3 | mRNA | upstream | 402277 | 3907898 ~ 3915777 (+) | True | ap4s1 |
| XM_007257912.3 | mRNA | upstream | 438736 | 3868553 ~ 3879318 (+) | True | coch |
| XM_007258893.3 | mRNA | downstream | 2227 | 4322554 ~ 4329505 (+) | True | klhdc2 |
| XM_007258894.2 | mRNA | downstream | 34429 | 4354756 ~ 4364804 (+) | True | mok |
| XM_007258895.3 | mRNA | downstream | 35240 | 4355567 ~ 4364804 (+) | False | mok |
| XM_007258903.3 | mRNA | downstream | 59980 | 4380307 ~ 4387505 (+) | True | LOC103042329 |
| XM_007258897.3 | mRNA | downstream | 146037 | 4466364 ~ 4486907 (+) | True | LOC103040906 |
| TU105324 | other | upstream | 19870 | 4289507 ~ 4298184 (+) | True | G78111 |
| trnav-cac_1 | other | upstream | 898055 | 3419927 ~ 3419999 (+) | True | trnav-cac_1 |
| trnav-aac_3 | other | upstream | 901143 | 3416839 ~ 3416911 (+) | True | trnav-aac_3 |
| trnav-aac_2 | other | upstream | 901814 | 3416168 ~ 3416240 (+) | True | trnav-aac_2 |
| TU104827 | other | upstream | 1339960 | 2900134 ~ 2978094 (+) | True | G77722 |
| TU105595 | other | downstream | 1131788 | 5452115 ~ 5527965 (+) | False | LOC103025550 |
| TU105776 | other | downstream | 2537082 | 6857409 ~ 6861157 (+) | False | LOC103024862 |
| TU106040 | other | downstream | 3274380 | 7594707 ~ 7607664 (+) | True | G78671 |
| TU106110 | other | downstream | 3336002 | 7656329 ~ 7670774 (+) | False | fam167b |
| TU106111 | other | downstream | 3336002 | 7656329 ~ 7729001 (+) | False | fam167b |
