Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU105946 |
| length | 329 |
| lncRNA type | inter_gene |
| GC content | 0.58 |
| exon number | 2 |
| gene id | G78603 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 7319609 ~ 7321250 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU105945 | lncRNA | upstream | 35745 | 7282651 ~ 7283864 (+) | True | G78602 |
| XR_002650305.1 | lncRNA | upstream | 64692 | 7252132 ~ 7254917 (+) | True | LOC111193179 |
| TU105864 | lncRNA | upstream | 350430 | 6968866 ~ 6969179 (+) | True | G78542 |
| TU105849 | lncRNA | upstream | 391553 | 6927354 ~ 6928056 (+) | True | G78531 |
| TU105848 | lncRNA | upstream | 391553 | 6927373 ~ 6928056 (+) | False | G78531 |
| XR_455482.3 | lncRNA | downstream | 21943 | 7343193 ~ 7346450 (+) | True | LOC103029755 |
| TU105961 | lncRNA | downstream | 21972 | 7343222 ~ 7346450 (+) | False | LOC103029755 |
| TU105997 | lncRNA | downstream | 68215 | 7389465 ~ 7389689 (+) | True | G78646 |
| TU106026 | lncRNA | downstream | 226206 | 7547456 ~ 7552368 (+) | True | G78668 |
| XR_455479.2 | lncRNA | downstream | 305747 | 7626997 ~ 7628892 (+) | True | LOC103026041 |
| XM_007257590.3 | mRNA | upstream | 7317 | 7284848 ~ 7312292 (+) | True | rab3gap2 |
| XM_007257592.3 | mRNA | upstream | 7317 | 7284848 ~ 7312292 (+) | False | rab3gap2 |
| XM_007257595.3 | mRNA | upstream | 42506 | 7255113 ~ 7277103 (+) | True | LOC103030509 |
| XM_022672650.1 | mRNA | upstream | 74857 | 7226490 ~ 7244752 (+) | True | LOC111193178 |
| XM_015606155.2 | mRNA | upstream | 246101 | 6974915 ~ 7073508 (+) | True | hhat |
| XM_007257587.3 | mRNA | downstream | 89179 | 7410429 ~ 7443721 (+) | True | rtn4ip1 |
| XM_022672659.1 | mRNA | downstream | 335057 | 7656307 ~ 7667801 (+) | False | fam167b |
| XM_022672660.1 | mRNA | downstream | 361591 | 7682841 ~ 7744462 (+) | True | lck |
| XM_015607946.2 | mRNA | downstream | 438599 | 7759849 ~ 7764677 (+) | True | LOC103024901 |
| XM_022672468.1 | mRNA | downstream | 445319 | 7766569 ~ 7799259 (+) | True | LOC103024072 |
| TU105776 | other | upstream | 458452 | 6857409 ~ 6861157 (+) | False | LOC103024862 |
| TU105595 | other | upstream | 1791644 | 5452115 ~ 5527965 (+) | False | LOC103025550 |
| TU105324 | other | upstream | 3021425 | 4289507 ~ 4298184 (+) | True | G78111 |
| trnav-cac_1 | other | upstream | 3899610 | 3419927 ~ 3419999 (+) | True | trnav-cac_1 |
| trnav-aac_3 | other | upstream | 3902698 | 3416839 ~ 3416911 (+) | True | trnav-aac_3 |
| TU106040 | other | downstream | 273457 | 7594707 ~ 7607664 (+) | True | G78671 |
| TU106110 | other | downstream | 335079 | 7656329 ~ 7670774 (+) | False | fam167b |
| TU106111 | other | downstream | 335079 | 7656329 ~ 7729001 (+) | False | fam167b |
| TU106244 | other | downstream | 1214666 | 8535916 ~ 8537682 (+) | True | G78818 |
| TU106242 | other | downstream | 1220878 | 8542128 ~ 8549968 (+) | False | G78817 |
