Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU106646 |
| length | 492 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 3 |
| gene id | LOC111193137 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 9866192 ~ 9868258 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU106639 | lncRNA | upstream | 35107 | 9824069 ~ 9831085 (+) | True | G79115 |
| TU106604 | lncRNA | upstream | 149928 | 9713212 ~ 9716264 (+) | True | G79097 |
| TU106590 | lncRNA | upstream | 178471 | 9687495 ~ 9687721 (+) | True | G79084 |
| TU106569 | lncRNA | upstream | 254428 | 9610735 ~ 9611764 (+) | True | G79065 |
| TU106565 | lncRNA | upstream | 306923 | 9559053 ~ 9559269 (+) | True | G79061 |
| TU106647 | lncRNA | downstream | 2342 | 9870600 ~ 9872719 (+) | True | G79123 |
| TU106649 | lncRNA | downstream | 2342 | 9870600 ~ 9872082 (+) | False | G79123 |
| TU106632 | lncRNA | downstream | 70859 | 9939117 ~ 9955038 (+) | False | LOC103029457 |
| TU106666 | lncRNA | downstream | 81331 | 9949589 ~ 9955787 (+) | True | G79139 |
| TU106668 | lncRNA | downstream | 88632 | 9956890 ~ 9958311 (+) | True | G79141 |
| XM_015603511.2 | mRNA | upstream | 46747 | 9766166 ~ 9819445 (+) | True | greb1 |
| XM_007240769.3 | mRNA | upstream | 46747 | 9766166 ~ 9819445 (+) | False | greb1 |
| XM_015603512.2 | mRNA | upstream | 46747 | 9766166 ~ 9819445 (+) | False | greb1 |
| XM_022672681.1 | mRNA | upstream | 46747 | 9782683 ~ 9819445 (+) | False | greb1 |
| XM_007237296.3 | mRNA | upstream | 311467 | 9495449 ~ 9554725 (+) | True | spata17 |
| XM_007240767.3 | mRNA | downstream | 14748 | 9883006 ~ 9940006 (+) | True | LOC103029457 |
| XM_007239248.3 | mRNA | downstream | 374330 | 10242588 ~ 10252495 (+) | True | LOC103026171 |
| XM_007239249.2 | mRNA | downstream | 414407 | 10282665 ~ 10292293 (+) | True | LOC103026492 |
| XM_007239250.3 | mRNA | downstream | 460710 | 10328968 ~ 10336716 (+) | True | LOC103026974 |
| XM_015603051.2 | mRNA | downstream | 484156 | 10352414 ~ 10362045 (+) | True | LOC103027561 |
| XR_002650310.1 | other | upstream | 311664 | 9495449 ~ 9554528 (+) | False | spata17 |
| TU106242 | other | upstream | 1316224 | 8542128 ~ 8549968 (+) | False | G78817 |
| TU106236 | other | upstream | 1316224 | 8543185 ~ 8549968 (+) | False | G78817 |
| TU106244 | other | upstream | 1328510 | 8535916 ~ 8537682 (+) | True | G78818 |
| TU106111 | other | upstream | 2137191 | 7656329 ~ 7729001 (+) | False | fam167b |
| TU107028 | other | downstream | 939113 | 10807371 ~ 10813470 (+) | False | fam98a |
| TU107323 | other | downstream | 1686424 | 11554682 ~ 11555139 (+) | True | G79654 |
| TU107406 | other | downstream | 2032837 | 11901095 ~ 11905385 (+) | True | G79717 |
| TU107455 | other | downstream | 2196586 | 12064844 ~ 12076211 (+) | True | G79761 |
| TU108374 | other | downstream | 4057611 | 13925869 ~ 13952198 (+) | True | LOC103026193 |
