Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU107308 |
| length | 335 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G79640 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 11532334 ~ 11532864 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU107307 | lncRNA | upstream | 184 | 11531898 ~ 11532150 (+) | True | G79639 |
| TU107306 | lncRNA | upstream | 527 | 11531557 ~ 11531807 (+) | True | G79638 |
| TU107305 | lncRNA | upstream | 5148 | 11526848 ~ 11527186 (+) | True | G79637 |
| TU107114 | lncRNA | upstream | 34156 | 11495584 ~ 11498178 (+) | True | G79504 |
| XR_001518605.2 | lncRNA | upstream | 53214 | 11476184 ~ 11479120 (+) | False | LOC107197512 |
| TU107312 | lncRNA | downstream | 2928 | 11535792 ~ 11536323 (+) | True | G79643 |
| XR_002650326.1 | lncRNA | downstream | 11812 | 11544676 ~ 11546017 (+) | True | LOC111193196 |
| XR_002650327.1 | lncRNA | downstream | 13416 | 11546280 ~ 11546774 (+) | True | LOC111193197 |
| TU107328 | lncRNA | downstream | 26916 | 11559780 ~ 11560109 (+) | True | G79659 |
| TU107359 | lncRNA | downstream | 158952 | 11691816 ~ 11692164 (+) | True | G79683 |
| XM_007238735.3 | mRNA | upstream | 717420 | 10801357 ~ 10814914 (+) | True | fam98a |
| XM_007238106.3 | mRNA | upstream | 767620 | 10727848 ~ 10764714 (+) | True | LOC103024809 |
| XM_022672473.1 | mRNA | upstream | 865660 | 10664458 ~ 10666674 (+) | True | LOC111193128 |
| XM_007238109.3 | mRNA | upstream | 979126 | 10538079 ~ 10553208 (+) | False | LOC103025860 |
| XM_022672688.1 | mRNA | upstream | 1170518 | 10352414 ~ 10361816 (+) | False | LOC103027561 |
| XM_022672726.1 | mRNA | downstream | 44375 | 11577239 ~ 11637984 (+) | True | LOC103032219 |
| XM_007242500.2 | mRNA | downstream | 277369 | 11810233 ~ 11823175 (+) | True | pex13 |
| XM_022672727.1 | mRNA | downstream | 353372 | 11886236 ~ 11962874 (+) | True | kiaa1841 |
| XM_022672723.1 | mRNA | downstream | 469929 | 12002793 ~ 12040710 (+) | False | LOC103021592 |
| XM_022672721.1 | mRNA | downstream | 469930 | 12002794 ~ 12040710 (+) | True | LOC103021592 |
| TU107028 | other | upstream | 718864 | 10807371 ~ 10813470 (+) | False | fam98a |
| XR_002650310.1 | other | upstream | 1977806 | 9495449 ~ 9554528 (+) | False | spata17 |
| TU106242 | other | upstream | 2982366 | 8542128 ~ 8549968 (+) | False | G78817 |
| TU106236 | other | upstream | 2982366 | 8543185 ~ 8549968 (+) | False | G78817 |
| TU106244 | other | upstream | 2994652 | 8535916 ~ 8537682 (+) | True | G78818 |
| TU107323 | other | downstream | 21818 | 11554682 ~ 11555139 (+) | True | G79654 |
| TU107406 | other | downstream | 368231 | 11901095 ~ 11905385 (+) | True | G79717 |
| TU107455 | other | downstream | 531980 | 12064844 ~ 12076211 (+) | True | G79761 |
| TU108374 | other | downstream | 2393005 | 13925869 ~ 13952198 (+) | True | LOC103026193 |
| TU108641 | other | downstream | 3193063 | 14725927 ~ 14728799 (+) | True | G80648 |
