Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU109443 |
| length | 1113 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G81220 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 16840224 ~ 16845728 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0005215 | transporter activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU109415 | lncRNA | upstream | 110050 | 16729820 ~ 16730174 (+) | True | G81197 |
| TU109405 | lncRNA | upstream | 120789 | 16716995 ~ 16719435 (+) | True | G81190 |
| TU109287 | lncRNA | upstream | 158292 | 16678648 ~ 16681932 (+) | True | G81124 |
| TU109267 | lncRNA | upstream | 218802 | 16619583 ~ 16621422 (+) | True | G81106 |
| TU109262 | lncRNA | upstream | 222100 | 16617687 ~ 16618124 (+) | True | G81105 |
| TU109449 | lncRNA | downstream | 18383 | 16864111 ~ 16864542 (+) | True | G81224 |
| TU109471 | lncRNA | downstream | 133689 | 16979417 ~ 16982929 (+) | True | G81243 |
| TU109534 | lncRNA | downstream | 185335 | 17031063 ~ 17031359 (+) | True | G81282 |
| TU109541 | lncRNA | downstream | 248056 | 17093784 ~ 17093985 (+) | True | G81288 |
| TU109544 | lncRNA | downstream | 274764 | 17120492 ~ 17120738 (+) | True | G81291 |
| XM_022672829.1 | mRNA | upstream | 1520 | 16782537 ~ 16838704 (+) | True | sh3yl1 |
| XM_022672828.1 | mRNA | upstream | 73218 | 16760823 ~ 16767006 (+) | False | LOC103031040 |
| XM_007239267.3 | mRNA | upstream | 73218 | 16760825 ~ 16767006 (+) | True | LOC103031040 |
| XM_015603055.2 | mRNA | upstream | 73218 | 16760827 ~ 16767006 (+) | False | LOC103031040 |
| XM_007239265.3 | mRNA | upstream | 73218 | 16760830 ~ 16767006 (+) | False | LOC103031040 |
| XM_007252209.3 | mRNA | downstream | 671244 | 17516972 ~ 17519541 (+) | True | LOC103043735 |
| XM_022672838.1 | mRNA | downstream | 908825 | 17754553 ~ 17876082 (+) | True | asap2 |
| XM_022672839.1 | mRNA | downstream | 908825 | 17754553 ~ 17876082 (+) | False | asap2 |
| XM_022672840.1 | mRNA | downstream | 908825 | 17754553 ~ 17876082 (+) | False | asap2 |
| XM_007252206.3 | mRNA | downstream | 908825 | 17754553 ~ 17876082 (+) | False | asap2 |
| TU108900 | other | upstream | 1256893 | 15563987 ~ 15583331 (+) | True | G80857 |
| TU108802 | other | upstream | 1658826 | 15174995 ~ 15181398 (+) | True | LOC111193203 |
| TU108651 | other | upstream | 2038387 | 14788602 ~ 14801837 (+) | False | LOC111193140 |
| TU108641 | other | upstream | 2111425 | 14725927 ~ 14728799 (+) | True | G80648 |
| TU108374 | other | upstream | 2888026 | 13925869 ~ 13952198 (+) | True | LOC103026193 |
| TU109871 | other | downstream | 1614402 | 18460130 ~ 18464096 (+) | False | LOC103035760 |
| TU109872 | other | downstream | 1614402 | 18460130 ~ 18464096 (+) | False | LOC103035760 |
| TU109873 | other | downstream | 1614402 | 18460130 ~ 18464096 (+) | False | LOC103035760 |
| TU109874 | other | downstream | 1614402 | 18460130 ~ 18464096 (+) | False | LOC103035760 |
| TU109875 | other | downstream | 1614402 | 18460130 ~ 18464096 (+) | False | LOC103035760 |
