Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU110607 |
| length | 771 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G82089 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 21019092 ~ 21019862 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU110591 | lncRNA | upstream | 70650 | 20947596 ~ 20948442 (+) | True | G82073 |
| TU110524 | lncRNA | upstream | 242615 | 20772756 ~ 20776477 (+) | True | G82014 |
| TU110492 | lncRNA | upstream | 475181 | 20543711 ~ 20543911 (+) | True | G81983 |
| TU110457 | lncRNA | upstream | 646700 | 20372114 ~ 20372392 (+) | True | G81955 |
| TU110415 | lncRNA | upstream | 717360 | 20301278 ~ 20301732 (+) | True | G81920 |
| TU110606 | lncRNA | downstream | 2208 | 21022070 ~ 21022572 (+) | True | G82088 |
| TU110608 | lncRNA | downstream | 3142 | 21023004 ~ 21023858 (+) | True | G82090 |
| TU110609 | lncRNA | downstream | 4273 | 21024135 ~ 21025804 (+) | True | G82091 |
| TU110743 | lncRNA | downstream | 371300 | 21391162 ~ 21394714 (+) | True | G82193 |
| TU110744 | lncRNA | downstream | 371300 | 21391162 ~ 21420420 (+) | False | G82193 |
| XM_007252553.3 | mRNA | upstream | 59701 | 20941708 ~ 20959391 (+) | False | mbip |
| XM_007252552.3 | mRNA | upstream | 59701 | 20941709 ~ 20959391 (+) | True | mbip |
| XM_007252551.3 | mRNA | upstream | 93424 | 20921537 ~ 20925668 (+) | True | LOC103043023 |
| XM_007252568.3 | mRNA | upstream | 101853 | 20915266 ~ 20917239 (+) | True | LOC103021743 |
| XM_007252556.3 | mRNA | upstream | 130294 | 20777438 ~ 20888798 (+) | False | slc25a21 |
| XM_007252549.3 | mRNA | downstream | 40833 | 21060695 ~ 21079622 (+) | True | cdan1 |
| XM_022672918.1 | mRNA | downstream | 61602 | 21081464 ~ 21136907 (+) | True | stard9 |
| XM_022672919.1 | mRNA | downstream | 121911 | 21141773 ~ 21189268 (+) | True | LOC103047712 |
| XM_022672920.1 | mRNA | downstream | 136281 | 21156143 ~ 21189268 (+) | False | LOC103047712 |
| XM_022672922.1 | mRNA | downstream | 174846 | 21194708 ~ 21279138 (+) | True | LOC103041063 |
| TU110179 | other | upstream | 1345454 | 19673127 ~ 19673638 (+) | True | G81763 |
| TU110177 | other | upstream | 1353045 | 19665736 ~ 19666047 (+) | True | G81761 |
| TU110107 | other | upstream | 2088338 | 18930238 ~ 18930754 (+) | True | G81704 |
| XR_002650340.1 | other | upstream | 2498145 | 18511622 ~ 18520947 (+) | False | LOC103033848 |
| TU109877 | other | upstream | 2554996 | 18460130 ~ 18464096 (+) | False | LOC103035760 |
| TU111179 | other | downstream | 1337782 | 22357644 ~ 22358135 (+) | True | G82488 |
| TU111323 | other | downstream | 2210568 | 23230430 ~ 23231318 (+) | True | G82609 |
| TU111569 | other | downstream | 2855577 | 23875439 ~ 23877767 (+) | False | timm9 |
| TU111570 | other | downstream | 2855577 | 23875439 ~ 23877767 (+) | True | timm9 |
| TU111581 | other | downstream | 2889820 | 23909682 ~ 23920698 (+) | True | G82811 |
