Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU110866 |
| length | 505 |
| lncRNA type | intronic |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G82258 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 21557417 ~ 21557995 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0032501 | multicellular organismal process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002650347.1 | lncRNA | upstream | 50626 | 21491701 ~ 21506791 (+) | True | LOC111193214 |
| TU110801 | lncRNA | upstream | 69203 | 21488012 ~ 21488214 (+) | True | G82234 |
| TU110744 | lncRNA | upstream | 136997 | 21391162 ~ 21420420 (+) | False | G82193 |
| TU110745 | lncRNA | upstream | 157533 | 21398686 ~ 21399884 (+) | True | G82194 |
| TU110743 | lncRNA | upstream | 162703 | 21391162 ~ 21394714 (+) | True | G82193 |
| TU110811 | lncRNA | downstream | 90269 | 21648264 ~ 21673438 (+) | False | ralgapa2 |
| TU110881 | lncRNA | downstream | 140336 | 21698331 ~ 21700510 (+) | False | G82266 |
| TU110887 | lncRNA | downstream | 140336 | 21698331 ~ 21700510 (+) | False | G82266 |
| TU110875 | lncRNA | downstream | 140724 | 21698719 ~ 21700510 (+) | False | G82266 |
| TU110880 | lncRNA | downstream | 140724 | 21698719 ~ 21700510 (+) | False | G82266 |
| XM_007252546.2 | mRNA | upstream | 261161 | 21282603 ~ 21296256 (+) | True | gpr68 |
| XM_022672922.1 | mRNA | upstream | 278279 | 21194708 ~ 21279138 (+) | True | LOC103041063 |
| XM_007252545.3 | mRNA | upstream | 278279 | 21194709 ~ 21279138 (+) | False | LOC103041063 |
| XM_022672919.1 | mRNA | upstream | 368149 | 21141773 ~ 21189268 (+) | True | LOC103047712 |
| XM_022672936.1 | mRNA | downstream | 356231 | 21914226 ~ 21926373 (+) | True | tmem87a |
| XM_007253814.3 | mRNA | downstream | 369571 | 21927566 ~ 21948191 (+) | True | vps39 |
| XM_007253813.3 | mRNA | downstream | 398013 | 21956008 ~ 21994947 (+) | True | galnt16 |
| XM_007253808.3 | mRNA | downstream | 442618 | 22000613 ~ 22046430 (+) | False | numb |
| XM_022672937.1 | mRNA | downstream | 442619 | 22000614 ~ 22046430 (+) | True | numb |
| TU110179 | other | upstream | 1883779 | 19673127 ~ 19673638 (+) | True | G81763 |
| TU110177 | other | upstream | 1891370 | 19665736 ~ 19666047 (+) | True | G81761 |
| TU110107 | other | upstream | 2626663 | 18930238 ~ 18930754 (+) | True | G81704 |
| XR_002650340.1 | other | upstream | 3036470 | 18511622 ~ 18520947 (+) | False | LOC103033848 |
| TU109877 | other | upstream | 3093321 | 18460130 ~ 18464096 (+) | False | LOC103035760 |
| TU111179 | other | downstream | 799649 | 22357644 ~ 22358135 (+) | True | G82488 |
| TU111323 | other | downstream | 1672435 | 23230430 ~ 23231318 (+) | True | G82609 |
| TU111569 | other | downstream | 2317444 | 23875439 ~ 23877767 (+) | False | timm9 |
| TU111570 | other | downstream | 2317444 | 23875439 ~ 23877767 (+) | True | timm9 |
| TU111581 | other | downstream | 2351687 | 23909682 ~ 23920698 (+) | True | G82811 |
