Item | Value |
---|---|
RNA id | TU110875 |
length | 881 |
lncRNA type | inter_gene |
GC content | 0.38 |
exon number | 5 |
gene id | G82266 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_035905.1 |
NCBI id | CM008308.1 |
chromosome length | 42966623 |
location | 21698331 ~ 21700510 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
species | mexican tetra (Astyanax mexicanus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU110811 | lncRNA | upstream | 25281 | 21648264 ~ 21673438 (+) | False | ralgapa2 |
TU110866 | lncRNA | upstream | 140724 | 21557417 ~ 21557995 (+) | True | G82258 |
XR_002650347.1 | lncRNA | upstream | 191928 | 21491701 ~ 21506791 (+) | True | LOC111193214 |
TU110801 | lncRNA | upstream | 210505 | 21488012 ~ 21488214 (+) | True | G82234 |
TU110745 | lncRNA | upstream | 298835 | 21398686 ~ 21399884 (+) | True | G82194 |
TU110891 | lncRNA | downstream | 20119 | 21720629 ~ 21721378 (+) | False | G82270 |
TU110892 | lncRNA | downstream | 20119 | 21720629 ~ 21721378 (+) | True | G82270 |
TU110952 | lncRNA | downstream | 86664 | 21787174 ~ 21788940 (+) | True | G82311 |
TU110989 | lncRNA | downstream | 167869 | 21868379 ~ 21869894 (+) | True | G82345 |
TU110993 | lncRNA | downstream | 177545 | 21878055 ~ 21878741 (+) | True | G82349 |
XM_022672931.1 | mRNA | upstream | 26579 | 21520907 ~ 21672140 (+) | True | ralgapa2 |
XM_007252546.2 | mRNA | upstream | 402463 | 21282603 ~ 21296256 (+) | True | gpr68 |
XM_022672922.1 | mRNA | upstream | 419581 | 21194708 ~ 21279138 (+) | True | LOC103041063 |
XM_007252545.3 | mRNA | upstream | 419581 | 21194709 ~ 21279138 (+) | False | LOC103041063 |
XM_022672920.1 | mRNA | upstream | 509451 | 21156143 ~ 21189268 (+) | False | LOC103047712 |
XM_022672936.1 | mRNA | downstream | 213716 | 21914226 ~ 21926373 (+) | True | tmem87a |
XM_007253814.3 | mRNA | downstream | 227056 | 21927566 ~ 21948191 (+) | True | vps39 |
XM_007253813.3 | mRNA | downstream | 255498 | 21956008 ~ 21994947 (+) | True | galnt16 |
XM_007253808.3 | mRNA | downstream | 300103 | 22000613 ~ 22046430 (+) | False | numb |
XM_022672937.1 | mRNA | downstream | 300104 | 22000614 ~ 22046430 (+) | True | numb |
TU110179 | other | upstream | 2025081 | 19673127 ~ 19673638 (+) | True | G81763 |
TU110177 | other | upstream | 2032672 | 19665736 ~ 19666047 (+) | True | G81761 |
TU110107 | other | upstream | 2767965 | 18930238 ~ 18930754 (+) | True | G81704 |
XR_002650340.1 | other | upstream | 3177772 | 18511622 ~ 18520947 (+) | False | LOC103033848 |
TU109877 | other | upstream | 3234623 | 18460130 ~ 18464096 (+) | False | LOC103035760 |
TU111179 | other | downstream | 657134 | 22357644 ~ 22358135 (+) | True | G82488 |
TU111323 | other | downstream | 1529920 | 23230430 ~ 23231318 (+) | True | G82609 |
TU111569 | other | downstream | 2174929 | 23875439 ~ 23877767 (+) | False | timm9 |
TU111570 | other | downstream | 2174929 | 23875439 ~ 23877767 (+) | True | timm9 |
TU111581 | other | downstream | 2209172 | 23909682 ~ 23920698 (+) | True | G82811 |