Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU110989 |
| length | 1038 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G82345 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 21868379 ~ 21869894 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0016491 | oxidoreductase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU110952 | lncRNA | upstream | 79439 | 21787174 ~ 21788940 (+) | True | G82311 |
| TU110891 | lncRNA | upstream | 147001 | 21720629 ~ 21721378 (+) | False | G82270 |
| TU110892 | lncRNA | upstream | 147001 | 21720629 ~ 21721378 (+) | True | G82270 |
| TU110875 | lncRNA | upstream | 167869 | 21698719 ~ 21700510 (+) | False | G82266 |
| TU110993 | lncRNA | downstream | 8161 | 21878055 ~ 21878741 (+) | True | G82349 |
| TU110979 | lncRNA | downstream | 10643 | 21880537 ~ 21881002 (+) | True | G82336 |
| TU111046 | lncRNA | downstream | 204648 | 22074542 ~ 22079050 (+) | True | G82383 |
| TU111124 | lncRNA | downstream | 268602 | 22138496 ~ 22141716 (+) | True | G82438 |
| TU111156 | lncRNA | downstream | 364609 | 22234503 ~ 22234891 (+) | True | G82465 |
| XM_022672931.1 | mRNA | upstream | 196239 | 21520907 ~ 21672140 (+) | True | ralgapa2 |
| XM_007252546.2 | mRNA | upstream | 572123 | 21282603 ~ 21296256 (+) | True | gpr68 |
| XM_022672922.1 | mRNA | upstream | 589241 | 21194708 ~ 21279138 (+) | True | LOC103041063 |
| XM_007252545.3 | mRNA | upstream | 589241 | 21194709 ~ 21279138 (+) | False | LOC103041063 |
| XM_022672920.1 | mRNA | upstream | 679111 | 21156143 ~ 21189268 (+) | False | LOC103047712 |
| XM_022672936.1 | mRNA | downstream | 44332 | 21914226 ~ 21926373 (+) | True | tmem87a |
| XM_007253814.3 | mRNA | downstream | 57672 | 21927566 ~ 21948191 (+) | True | vps39 |
| XM_007253813.3 | mRNA | downstream | 86114 | 21956008 ~ 21994947 (+) | True | galnt16 |
| XM_007253808.3 | mRNA | downstream | 130719 | 22000613 ~ 22046430 (+) | False | numb |
| XM_022672937.1 | mRNA | downstream | 130720 | 22000614 ~ 22046430 (+) | True | numb |
| TU110179 | other | upstream | 2194741 | 19673127 ~ 19673638 (+) | True | G81763 |
| TU110177 | other | upstream | 2202332 | 19665736 ~ 19666047 (+) | True | G81761 |
| TU110107 | other | upstream | 2937625 | 18930238 ~ 18930754 (+) | True | G81704 |
| XR_002650340.1 | other | upstream | 3347432 | 18511622 ~ 18520947 (+) | False | LOC103033848 |
| TU109877 | other | upstream | 3404283 | 18460130 ~ 18464096 (+) | False | LOC103035760 |
| TU111179 | other | downstream | 487750 | 22357644 ~ 22358135 (+) | True | G82488 |
| TU111323 | other | downstream | 1360536 | 23230430 ~ 23231318 (+) | True | G82609 |
| TU111569 | other | downstream | 2005545 | 23875439 ~ 23877767 (+) | False | timm9 |
| TU111570 | other | downstream | 2005545 | 23875439 ~ 23877767 (+) | True | timm9 |
| TU111581 | other | downstream | 2039788 | 23909682 ~ 23920698 (+) | True | G82811 |
