Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU115582 |
| length | 1150 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 3 |
| gene id | G85842 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 35342357 ~ 35349126 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU115585 | lncRNA | upstream | 10820 | 35331234 ~ 35331537 (+) | True | G85845 |
| TU115572 | lncRNA | upstream | 123940 | 35211607 ~ 35218417 (+) | True | G85835 |
| TU115571 | lncRNA | upstream | 146081 | 35195916 ~ 35196276 (+) | True | G85834 |
| TU115409 | lncRNA | upstream | 705157 | 34636506 ~ 34637200 (+) | True | G85709 |
| TU115410 | lncRNA | upstream | 766139 | 34575847 ~ 34576218 (+) | True | G85710 |
| TU115583 | lncRNA | downstream | 1701 | 35350827 ~ 35353969 (+) | True | LOC111193253 |
| XR_002650393.1 | lncRNA | downstream | 2338 | 35351464 ~ 35364586 (+) | False | LOC111193253 |
| XR_002650392.1 | lncRNA | downstream | 2338 | 35351464 ~ 35364581 (+) | False | LOC111193253 |
| XR_002650391.1 | lncRNA | downstream | 2338 | 35351464 ~ 35353988 (+) | False | LOC111193253 |
| TU115608 | lncRNA | downstream | 102066 | 35451192 ~ 35525452 (+) | True | G85867 |
| XM_022673206.1 | mRNA | upstream | 2525 | 35288215 ~ 35339832 (+) | False | tfb1m |
| XM_022673207.1 | mRNA | upstream | 2525 | 35288216 ~ 35339832 (+) | False | tfb1m |
| XM_015605628.2 | mRNA | upstream | 72889 | 35264933 ~ 35269468 (+) | True | LOC103041454 |
| XM_007248452.3 | mRNA | upstream | 549895 | 34787350 ~ 34792462 (+) | True | LOC103028446 |
| XM_022673203.1 | mRNA | upstream | 556242 | 34767062 ~ 34786115 (+) | True | LOC103028138 |
| XM_022673218.1 | mRNA | downstream | 287684 | 35636810 ~ 35656610 (+) | False | LOC111193254 |
| XM_022673219.1 | mRNA | downstream | 318574 | 35667700 ~ 35686642 (+) | True | LOC103042380 |
| XM_022673220.1 | mRNA | downstream | 318623 | 35667749 ~ 35686642 (+) | False | LOC103042380 |
| XM_022673221.1 | mRNA | downstream | 447024 | 35796150 ~ 35873071 (+) | True | LOC103042687 |
| XM_022673222.1 | mRNA | downstream | 447024 | 35796150 ~ 35873071 (+) | False | LOC103042687 |
| TU115579 | other | upstream | 2526 | 35321512 ~ 35339831 (+) | True | tfb1m |
| TU115452 | other | upstream | 541980 | 34746814 ~ 34800377 (+) | True | G85740 |
| TU114974 | other | upstream | 2901041 | 32436232 ~ 32441316 (+) | False | LOC103037843 |
| TU114975 | other | upstream | 2901041 | 32436232 ~ 32441316 (+) | False | LOC103037843 |
| XR_002650385.1 | other | upstream | 3123595 | 32199891 ~ 32218762 (+) | False | LOC103035447 |
| TU115713 | other | downstream | 287701 | 35636827 ~ 35658087 (+) | True | LOC111193254 |
| trnat-ugu_82 | other | downstream | 2249051 | 37598177 ~ 37598249 (+) | True | trnat-ugu_82 |
| TU116491 | other | downstream | 3316041 | 38665167 ~ 38698313 (+) | True | G86497 |
| XR_002650291.1 | other | downstream | 3708585 | 39057711 ~ 39058582 (+) | False | LOC111193151 |
| TU116802 | other | downstream | 4569832 | 39918958 ~ 39983040 (+) | True | G86752 |
