Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU115583 |
| length | 1079 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 3 |
| gene id | LOC111193253 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 35350827 ~ 35364586 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU115582 | lncRNA | upstream | 1701 | 35342357 ~ 35349126 (+) | True | G85842 |
| TU115585 | lncRNA | upstream | 19290 | 35331234 ~ 35331537 (+) | True | G85845 |
| TU115572 | lncRNA | upstream | 132410 | 35211607 ~ 35218417 (+) | True | G85835 |
| TU115571 | lncRNA | upstream | 154551 | 35195916 ~ 35196276 (+) | True | G85834 |
| TU115409 | lncRNA | upstream | 713627 | 34636506 ~ 34637200 (+) | True | G85709 |
| TU115608 | lncRNA | downstream | 97223 | 35451192 ~ 35525452 (+) | True | G85867 |
| TU115612 | lncRNA | downstream | 176289 | 35530258 ~ 35533775 (+) | True | G85870 |
| TU115624 | lncRNA | downstream | 218749 | 35572718 ~ 35595137 (+) | True | G85878 |
| TU115629 | lncRNA | downstream | 224046 | 35578015 ~ 35578859 (+) | False | G85882 |
| TU115630 | lncRNA | downstream | 224046 | 35578015 ~ 35578859 (+) | True | G85882 |
| XM_022673206.1 | mRNA | upstream | 10995 | 35288215 ~ 35339832 (+) | False | tfb1m |
| XM_022673207.1 | mRNA | upstream | 10995 | 35288216 ~ 35339832 (+) | False | tfb1m |
| XM_015605628.2 | mRNA | upstream | 81359 | 35264933 ~ 35269468 (+) | True | LOC103041454 |
| XM_007248452.3 | mRNA | upstream | 558365 | 34787350 ~ 34792462 (+) | True | LOC103028446 |
| XM_022673203.1 | mRNA | upstream | 564712 | 34767062 ~ 34786115 (+) | True | LOC103028138 |
| XM_022673218.1 | mRNA | downstream | 282841 | 35636810 ~ 35656610 (+) | False | LOC111193254 |
| XM_022673219.1 | mRNA | downstream | 313731 | 35667700 ~ 35686642 (+) | True | LOC103042380 |
| XM_022673220.1 | mRNA | downstream | 313780 | 35667749 ~ 35686642 (+) | False | LOC103042380 |
| XM_022673221.1 | mRNA | downstream | 442181 | 35796150 ~ 35873071 (+) | True | LOC103042687 |
| XM_022673222.1 | mRNA | downstream | 442181 | 35796150 ~ 35873071 (+) | False | LOC103042687 |
| TU115579 | other | upstream | 10996 | 35321512 ~ 35339831 (+) | True | tfb1m |
| TU115452 | other | upstream | 550450 | 34746814 ~ 34800377 (+) | True | G85740 |
| TU114974 | other | upstream | 2909511 | 32436232 ~ 32441316 (+) | False | LOC103037843 |
| TU114975 | other | upstream | 2909511 | 32436232 ~ 32441316 (+) | False | LOC103037843 |
| XR_002650385.1 | other | upstream | 3132065 | 32199891 ~ 32218762 (+) | False | LOC103035447 |
| TU115713 | other | downstream | 282858 | 35636827 ~ 35658087 (+) | True | LOC111193254 |
| trnat-ugu_82 | other | downstream | 2244208 | 37598177 ~ 37598249 (+) | True | trnat-ugu_82 |
| TU116491 | other | downstream | 3311198 | 38665167 ~ 38698313 (+) | True | G86497 |
| XR_002650291.1 | other | downstream | 3703742 | 39057711 ~ 39058582 (+) | False | LOC111193151 |
| TU116802 | other | downstream | 4564989 | 39918958 ~ 39983040 (+) | True | G86752 |
