RNA id: XM_007251957.3


Basic Information

Item Value
RNA id XM_007251957.3
length 1842
RNA type mRNA
GC content 0.42
exon number 12
gene id rmnd1
representative True

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 24264445 ~ 24269866 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GACCTGAAACGTAGTGCGTGATGTCACGAACACAAGAAGCACACATGCCGACACTGTGCAGCGCACTGTGGAGATACACTGTATCTGAGCTGTCCTGCAATTAAACATGTGTGTTTAGAAACGAGTGAGCTGGTAGATCCAGCTATGGTCCTCCGCTGGTGTGTCTTCAGCAGGAGCTGTGTTGgtagCTAGCCAGATATGCTAGCCAGGACTTGTTCAGCATTGTGgagactgcagcagcagcagcccttGGAGAGAATACATTTCTCCAGGTTGTTTCCAGCACTAGCAGGACGGAGAGAAAATGGGCTTTGCTCCAGGGTCAAATGCTTTACACCCAACCTCTTGACACAGAGTCTGTCTTCACATAGTCTTTATACAGACCAGAAGAAGCAGGATGCTCACACCAGCTCTTCCCATCTTTGGTGGTCTTCAGGACTTCAAAGAGGAGCACATAAAGGACCTCACATGGTTTACACAGAATCACTTGTCTTAGATATGATGATGCCCAAAGCATGGCGTATGCACACAAGACTAAAGTCCACCACGACAGCTACTAAATCTGTGCTGCTGCAGGGAGGCGTACCTGGCAAAAGAACATTAAAGGGACCAAGGACAAAGCAGCCATCAAGAGCCAACCTGCCTGCCCCAGAAGAGGATATGATGCAGTGTATTGCCTATGCAACTGCGGACCAGTACCACCTACCAACTCTCTGTCATGATCTGATAGCCAATGGCTTTTTTGAAATTAGAGACCTTCCCAGAGATGCCTCAAATGTCTTGGTGATTGGAGCAGAGTCAGTGTCAAAACCAGATGACACTGCTATGATATTTTTCTTCAGAGAAGGTTCAGTGGTTTTCTGGAATGTCACAGAGAAAGATGTAAAGAAAGTAATGAGAATATTGGAGCAACATGAGATTCAGCCGTATGAAGTGGCCTTGGTTCACTGGGAAAATGAAGAGATTAATTATACAGTAGGAGAGGGAAATTCGAAGCTGTACAGAGGAAACTTCATATTCAATGCTGAGATGGACTACGAACAACAGATTCTGGAGAAATTTGCATTTTCCAATGCCTTGTCTCTGTCAGTTAAGCTGGCAATATGGGAGATCTCTCTGGATAACTTTGTTGAATCTATTCAGTCAATTCCTGAGACACTGAAAtctggaaaaacagtaaaactctCCAGGGCAGAGGTGTTGCAGAAAATAGGTGAACTCTTTGCACTAAGGTACTGCATAAACCTCAGTTCTGATCTACTTATCACACCTGACTTTTACTGGGACAGAGAAGACCTGGAGCAGCTGTATGACAAAACCTGTCAGTTTCTCAATATCAACCGTAGGGTCAAGGTTGTGAACGAGAAGCTGCAACACTGCACTGAACTGACAGACCTCATGAGAAACCACCTCGGTGAAAAGCACAGTCTTCGACTGGAGTGGATGATCGTAATCCTCATTACTATTGAGGTAATGTTTGAACTGGCCCGGGTGATCTTCTAAAGAGATTATAGAAGATACAGGAGCTATGGCAAAAGATTATCCCTGTCTGAAACCAGCaagaacacaaaatcttctccaaaagaaatgatttaatttacGCTTAGTGTTTAGTGATatgctgtagtttttttttgtttttttttaaatctcagtatTTTCAATAGTTCATGCCATGTacttacaaattaattaaatgctgttttttgtctGATAGAAATGTATAGTGCTTGTTGTCTTTATAAGATAAACAATTTATGTGAATCTTGAAAAATTGTCATTTGTATGCAGTGAAAGAAAAAACCACATTGAGGatattaaatagctaaatgttcAAAAAAA

Function

GO: NA

KEGG:

id description
K23499 RMND1; required for meiotic nuclear division protein 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU111624 lncRNA upstream 126830 24136576 ~ 24138904 (+) True G82838
TU111583 lncRNA upstream 291759 23909682 ~ 23973975 (+) False G82811
TU111585 lncRNA upstream 342874 23922348 ~ 23922860 (+) False G82811
TU111590 lncRNA upstream 350275 23913129 ~ 23915459 (+) True G82816
TU111588 lncRNA upstream 357126 23908338 ~ 23908608 (+) True G82814
TU111920 lncRNA downstream 44849 24314715 ~ 24314965 (+) True G83064
TU111934 lncRNA downstream 79575 24349441 ~ 24350477 (+) True G83071
TU111933 lncRNA downstream 79663 24349529 ~ 24350535 (+) False G83071
XR_002650357.1 lncRNA downstream 87109 24356975 ~ 24367973 (+) True LOC111193226
XR_002650358.1 lncRNA downstream 302462 24572328 ~ 24576551 (+) True LOC111193227
XM_022672982.1 mRNA upstream 8484 24167119 ~ 24257250 (+) True syne1
XM_022672980.1 mRNA upstream 140619 24113136 ~ 24125115 (+) True ahi1
XM_007251958.3 mRNA downstream 1476 24271342 ~ 24275108 (+) True LOC103045657
XM_007251961.3 mRNA downstream 29305 24299171 ~ 24302766 (+) True stx11
XM_015606503.2 mRNA downstream 47444 24317310 ~ 24336229 (+) True LOC103045057
XM_022672986.1 mRNA downstream 47444 24317310 ~ 24336229 (+) False LOC103045057
XM_007251966.3 mRNA downstream 114012 24383878 ~ 24403591 (+) True LOC103047809
TU111651 other upstream 123502 24139389 ~ 24142232 (+) True G82853
TU111581 other upstream 345036 23909682 ~ 23920698 (+) True G82811
TU111569 other upstream 387967 23875439 ~ 23877767 (+) False timm9
TU111570 other upstream 387967 23875439 ~ 23877767 (+) True timm9
TU111323 other upstream 1034416 23230430 ~ 23231318 (+) True G82609
trnal-uaa_1 other downstream 36745 24306611 ~ 24306693 (+) True trnal-uaa_1
trnal-uaa_2 other downstream 37485 24307351 ~ 24307433 (+) True trnal-uaa_2
trnal-uaa_3 other downstream 38942 24308808 ~ 24308890 (+) True trnal-uaa_3
trnal-uaa_4 other downstream 40547 24310413 ~ 24310495 (+) True trnal-uaa_4
trnal-cag_10 other downstream 557808 24827674 ~ 24827756 (+) True trnal-cag_10

Expression Profile