RNA id: XM_007252041.3


Basic Information

Item Value
RNA id XM_007252041.3
length 4199
RNA type mRNA
GC content 0.40
exon number 4
gene id enpp4
representative True

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 25087603 ~ 25095143 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

AGGGAAGGACGTTGTTGAGGAAGCAAGAAACCGGTCGTTGTTCTtatgtttggttaaacgctAAAATGCCTGACAGTTGTTCGCTTATTTAACGTTAGATATAAACCGGTCGTTTAACTCGACTATTTAATTTATCCTGGACATAGAGGCAAATAAAGCTACGGGTGGGAcgtaaatgtacttttaaagaaTACTGAGGCTGATAAAATCTCATCCATGCCCGCAGGATGCATCTCAAAGCTCTTCTGTGTTTATTAGTGGCCTGTTATGAATCAGCTGCATCTCTAAATACAGAAAATGCAACACAAAAAGACTTCCCACCACTACTGCTTATATCATTTGATGGTTTCAGGGCAGACTATCTGAAAAAATACTCTTTCCCCAATCTGCAGAAGTTCTTTTCAGCTGGGGTTCTTATCGACCATCTCACCAATGTGTTCGTAACTAAAACTTTTCCTAACCATTACAGTCTTGCTACAGGTCTGTATGCAGAAAGCCATGGTATTTTGGCCAGTCATATGTTTGATccagtgacaaaaaaaaagttctctcTTGAAGATGACACTGATCCTTTCTGGTGGAATGAAGCAACACCCATTTGGGTGTCTGTGCAGAAATGGGGCTATAAATCCGCCGCTGCTATGTGGCCAGGAACGGACGTTATGATTCAAAACCATACCTCAACAAACTTCATGAAGTATGATTCAAAAGTGAGCTTCAGGGAGAGACTGGGAAACATCACAACGTGGATGACTGAAGACAACTCTGTCAAGTTTGCAGCACTCTACTGGGAGGAGCCTGACCATACTGGACATATCTTTGGGCcagaaaacacaacagaaatgACCAGGGCACTGAAAGAGGTGGATGATGATGTAGGTTTTATGATGGAGCACCTCAACAACTCGGGGCTCTGGGGAAAGATTAATGTGATTATTACAAGTGACCACGGTATGGTTCAGTGCTCCAAGGATAGACTTATTAAGCTGGACCAGTGTATCAGCCGCAGCAGCTACACGTTGGTGGACCTCACTCCAGTGGCTGCCCTCGTGCCTATTAATGATGCCACAGATCTATACAAAAACCTGAGTAACTGTCATCCACACATGAAGGCTTACCTAAAGGATGCAGTCCCTGATAAACTGCACTACAGGAACAATGAGAGGATTCAGCCAATCATCTTGGTGGCTGATGAAGGTTGGACAATTGTCCAGAACGGCAGCCTCCCACGATTGGGAGATCATGGCTATGATAACTCCCTCAGCAGTATGCACCCCTTCTTGGCAGCAAACGGCCCTGCTTTTCGTAAAGGCTACCGCATGGAGACCATCAACAGTGTGGACCTGTACCCTCTCATGTGTCACCTCTTGGGCATCCCAGAGATGCCCAACAACGGCAGTTTCTCACACATACGTTGCACGCTGGTCAGTGAGAAGTGCACAGACCTGGCTGTTGTGGTGGGCATCGTTATTGGAGTCTTTATAGTGCTCACCACCCTCACGTTCCTCTTCAGACTGATGAAGAACAGAGATCCATCATCATCACGGCCGTTTGCTCGCTTGGAGCTGCAGGAAGATGATGACGACGATGACCCTTTGCTTGAGTGAGCTGCTGAGTGTTTGGATGGAGGTGTGCAGTCTCTCAAGTCCAGGgtatttaattttgttcagGCATTCGAGATGATGGCCAAAGAAGAGAGAATCGGAGAAGACAATCATGAACAGAGTTTAGGAAATGAGTCAAGGGCTTTGCTTAATggatgatttaaaaaagaaaaagctaaaatatGTCTAGCATAGTAAAAGATGGTCAAATTTTCAGCTTGTCAAAGTACACTATAtgaaaaaagtattgggacaccagaTCAATTATTGTTTCTTTCAAAATCAGGGGTGttagagtttatcctgcttttgttggactAACTCTCTCTATTGTgcagggaaggctttctactagacttTTGAGAATTGCTAAGATGATTTGATTGCGTTCAGTGACAGAAGCGTTAGTGTTGGATAACCATCACTCACCTCGTTGCCAACTACGGTACCCAACTCATCTAGCACAGACCTGTCATTAAGCATGGTACAGATAGGATTATGTTTTCAGGTccagagaattttttttattggcagtACATCTGTATAGGCACTAGACAAGCTGTGGGTGTGCTTTGcagatttgttttttgtattaagtGCAACTGTAAACATTGCTGAATACATCAATTCAGGTGgttgtagtgtgtatatatatatgagggTATTGTGATtatgtttatatacttttaataaggCATGAATGtacataatacagtaatatgGCATTATGTAGCTATTTCGCAGTTTTAAAAGACCATTATAAAATAGTAGAATACACAGATGAGGTAAAACATTAGCACCTGATATGCTTTAAAGGTGTCCTGTAACATCTGTCTCTCTTCTTCCTGCTGTTGTTACTGTTAATTTGTCCAAACTTGGACCACTACCTGTGTTACTGTTCACCAGGAATGCCCAAGCCATAATAATTTAGCAATTAATAAAGCCACACTCCTGCATCTGAATTGTCACCTACGAGAACCAACGGTTCActtactgtataatataatataggcCTGAGATGAGGCATTGTTTTTAGAATAGTCATAATGTTTTTGCTTATTGTTTTCTGTGCTATATCTTAATTGAATATCCCTACAGCTAGTGTCTGGCACACTATAATGAATATTGTGGTTTTACTTGAGGCCTTGTGATTGGCTCAACAAATGAACTTACTTAAAGTGCACTGCAAAGTACAGTAATGTTCTGTTCTTTCAAATactctgacatgccaaaagtcatggaacaggaGCTAATActgtgttccatgacttttgccatgccctATTTAAGTTAGAGAATTCTGCAATAACCTGTGAGCTGTTTGTTGGGTCTCCAGCATTGAGTGTGGACGTTGTTATTTCTGTATGATTCACTTGTATGCCATGAGCACGCTGGCCAATGTTCAGCTTagttcacaagataacacctcataacttatacaggtgtgagcgAGTCTAAGCCATCCTCTGAGGAAACACTCCTTGATTACTTTACATATTTCAATCCCATGACGTTTGGCCTGTCAGTGCATTTGattgtttgttaattttttgttgttgttggccttttttaaaatgatgtcaGCTGACTGCACAGTATAGAGCTGATTTATTGTTGTTCCGTCTGGAATGCAGGATGGATGTGCgcactgtacattttttttttgttacatttactaCTGTAGGTCAGGTGTCTTTCATTAAGGATGCAGggaatgtaatttaatttaattaatcttccatttcctcaatGAATACGAGTGCTGTTATTTAATCACCTTTAAGAGTCTTGATATTTAAGATTAATTtgtcactgtttaaaaaaaaaaatctatttttctattttggtGGTACGTTTTTGTTTTAATCGTGGTATGTGGCATAAGAATTGTTTTAACTGTCTTCTCTGAGAACCTTTTATGGTTTCTTTGAAGAACCTTCAAGAAAAGTATTCCTTGAAGCAACATCAATCTTTCTTTAAGGTTCGTCAAAGCACCTTAAGGGATTCCTCCACAGTTTCAGACTGAAGGACCCCTAAAAGCTCCTATAGGAACATTTTAATAGTGTGTAGCTAAAGGCCCTCTAAAAGTTCAGATTTTATGGGCAGAAAAAAAACGCAAGTTTTGAAAACAAAGGTACACGTATAATATGTATGTCTTTTACACCAATGCTGCTTAAAATGATCTGTCAGAAcctattctatttttttcagttcagttcattttgagCTCTTTTGTCATGGTTACAGCCAGGTCTGATTCAGTGTACAgcatttacttaattaaaaaaatcatatctggGTTATTCCTCTGTGTCACAGGGCCCTAAGGCCTTCACAAAAAAAGTctgttatttatgtttgttgttgaggatttaagaatttaagaatctgttgcttgtttgtttttcctgAATCAAGTGTTCCTAaagcttttttcttctttttgtctttatttttgctatatGAGGTATATAAGGCAGAGATTGCACTGTAGTATCACTGAATCTATGCAAGAATGACTGTCAGTCTTCTGAACTCGGGTAATGGTATTTGTGTgagcaaaaattaaataaaacctttGTTCATATGTTTAAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0007596 blood coagulation biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0047710 bis(5'-adenosyl)-triphosphatase activity molecular_function

KEGG:

id description
K18424 ENPP4; ectonucleotide pyrophosphatase/phosphodiesterase family member 4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU112264 lncRNA upstream 155064 24931919 ~ 24932539 (+) True G83307
TU112242 lncRNA upstream 162788 24918425 ~ 24924815 (+) False ephx2
TU112240 lncRNA upstream 193964 24893243 ~ 24893639 (+) True G83295
TU112074 lncRNA upstream 247475 24838530 ~ 24840128 (+) True G83180
TU112060 lncRNA upstream 314810 24771882 ~ 24772793 (+) True G83167
TU112322 lncRNA downstream 32817 25127960 ~ 25132154 (+) True G83354
TU112323 lncRNA downstream 32817 25127960 ~ 25187909 (+) False G83354
TU112325 lncRNA downstream 65775 25160918 ~ 25167969 (+) False supt3h
TU112432 lncRNA downstream 266584 25361727 ~ 25367281 (+) True G83438
TU112433 lncRNA downstream 266584 25361727 ~ 25363334 (+) False G83438
XM_007252038.3 mRNA upstream 16498 25045713 ~ 25071105 (+) True xkr6
XM_007252037.3 mRNA upstream 53590 25029997 ~ 25034013 (+) False c9h8orf74
XM_007252036.3 mRNA upstream 53590 25029998 ~ 25034013 (+) True c9h8orf74
XM_015606535.2 mRNA upstream 78826 24998335 ~ 25008777 (+) True LOC103039108
XM_007252055.3 mRNA upstream 89729 24981376 ~ 24997874 (+) True gckr
XM_007252040.3 mRNA downstream 2896 25098039 ~ 25109750 (+) True clic5
XM_022673033.1 mRNA downstream 65841 25160984 ~ 25329482 (+) False supt3h
XM_022673032.1 mRNA downstream 65842 25160985 ~ 25317375 (+) True supt3h
XM_022673038.1 mRNA downstream 65842 25160985 ~ 25317375 (+) False supt3h
XM_022673039.1 mRNA downstream 65843 25160986 ~ 25317375 (+) False supt3h
TU112312 other upstream 53482 25030037 ~ 25034121 (+) False c9h8orf74
TU112274 other upstream 152053 24935073 ~ 24935550 (+) False LOC111193228
trnal-cag_10 other upstream 259847 24827674 ~ 24827756 (+) True trnal-cag_10
trnal-uaa_4 other upstream 777108 24310413 ~ 24310495 (+) True trnal-uaa_4
trnal-uaa_3 other upstream 778713 24308808 ~ 24308890 (+) True trnal-uaa_3
XR_002650360.1 other downstream 824414 25919557 ~ 25972243 (+) False LOC103033015
TU112640 other downstream 1140355 26235498 ~ 26249096 (+) False G83602
XR_002650363.1 other downstream 1297747 26392890 ~ 26399267 (+) False spata7
trnay-gua_9 other downstream 1412897 26508040 ~ 26508125 (+) True trnay-gua_9
TU112857 other downstream 1632680 26727823 ~ 26747751 (+) False fermt2

Expression Profile