RNA id: XM_007252202.3



Basic Information


Item Value
RNA id XM_007252202.3
length 1232
RNA type mRNA
GC content 0.49
exon number 6
gene id iah1
representative True

Chromosome Information


Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 17897957 ~ 17902838 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


GCAGGGGGCGTCAGACAGCAGGACTGGAGCTGCTGGTTTGGTGGTGAACTGTGAAGAAGACAGTTTGAAGGAGTTTGTGGTGTTTATATTTCAGAATGTCTAAAATAAAGAGCATTGTTTGGCCGCAGGTCGTTCTGTTCGGGGATTCCATTACACAGTTCTCCTTTCAGGTGAACGGCTGGGGCTCTGAGATAGCGAACAGACTGGCGAGGAAATGCGACGTGGTGAACAGGGGTCTGTCAGGGTACAACACGCGCTGGGCTAAAATAGTTCTGCCCCGCCTCCTGCCGGCCTGCCCCCCGGCCTGTCCTGTGGCAGCAGTGACCGTCTTCTTCGGAGCCAACGACTGTTCCCTGCAGGATAAGAACCCCCAGCAGCACATACCCTGTGAGGAGTACACTGAGAACCTGAAAGACATGGTTAAATACCTGGCCTCAGCCGGAGTGTCTAATGACAAAGTTATCTTCATTACCCCTCCACCACTTCATGAGCCATCATGGGAGAAAGAGTGCATCCTGAAAGGTTCCTCTCTGAACCGCCTGAACTCTGTGACTGGTCAGTACGCTCAGGCTTGTGTCCAGACTGCAGGTCAGTGTGGGGTGGACGTGCTTGATCTGTGGTCTCTCATGCAGAAGGATGGACAGGATTTCACAGTCTACCTCTCTGATGGATTGCACCTCTCCGAGAAAGGCAACCAGTTTGTGGCCGAGCACCTGTGGAAATTGCTGGAGAGCAGAGTGGCTGACCTTCCCTTCATCTTGCCTTATTGGGCAGATGTGGACGCAAAAAACCCAGAGAACAGTCTCCTGTGTGATTAGACTCAGCAGGCCTGATATTCCACAGAAGATCTGAACTACTGTAAACCACTGCACACTGACGTTTGGTTACATTTGACTTGTTTCAGTCTGGGAAGGGTGTTTTTATCATGTGCACACAGGCCCTTTCTCATTTCATGGAACTTCTTGGGAAAACCTGTCTGACAGCACAAGTAAGGAGCTgctacaaaatatatttgagtCCCATAGGAACTACGGACGTAAGGTTCTGAGACCTCATCCACAGGTATCtgccttttttaaaaacatatggaCTCCTCGCCACACAgctttgtggattttttttttgtgaacgtTGATGTCGCAGTGCACGCCTGACTCTCACATACCTCCTTACCTTGTATATACAGGTTCATCTtaataaattttaatattaaacgcaaaaagtgaaactca

Function


GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0016788 hydrolase activity, acting on ester bonds molecular_function

KEGG:

id description
K23978 IAH1; isoamyl acetate esterase

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU109633 lncRNA upstream 3606 17892302 ~ 17894351 (+) True G81358
TU109624 lncRNA upstream 18195 17879030 ~ 17879762 (+) True G81349
TU109615 lncRNA upstream 168510 17728966 ~ 17729447 (+) True G81347
TU109590 lncRNA upstream 257476 17636704 ~ 17640481 (+) True G81335
TU109597 lncRNA upstream 257476 17636965 ~ 17640481 (+) False G81335
TU109731 lncRNA downstream 124710 18027548 ~ 18037050 (+) False cmpk2
TU109747 lncRNA downstream 173534 18076372 ~ 18095098 (+) True G81446
TU109754 lncRNA downstream 233774 18136612 ~ 18137206 (+) True G81452
TU109762 lncRNA downstream 306947 18209785 ~ 18210341 (+) True G81460
TU109770 lncRNA downstream 363381 18266219 ~ 18266484 (+) True G81465
XM_022672838.1 mRNA upstream 21875 17754553 ~ 17876082 (+) True asap2
XM_022672839.1 mRNA upstream 21875 17754553 ~ 17876082 (+) False asap2
XM_022672840.1 mRNA upstream 21875 17754553 ~ 17876082 (+) False asap2
XM_007252206.3 mRNA upstream 21875 17754553 ~ 17876082 (+) False asap2
XM_007252207.3 mRNA upstream 21875 17754553 ~ 17876082 (+) False asap2
XM_022672845.1 mRNA downstream 124469 18027307 ~ 18037074 (+) True cmpk2
XM_007252538.3 mRNA downstream 381739 18284577 ~ 18306094 (+) True eprs
XM_007252539.3 mRNA downstream 381739 18284577 ~ 18306088 (+) False eprs
XM_007252537.3 mRNA downstream 405409 18308247 ~ 18315290 (+) True LOC103038992
XM_007252531.3 mRNA downstream 432262 18335100 ~ 18342283 (+) True ahsa1
TU108900 other upstream 2314626 15563987 ~ 15583331 (+) True G80857
TU108802 other upstream 2716559 15174995 ~ 15181398 (+) True LOC111193203
TU108651 other upstream 3096120 14788602 ~ 14801837 (+) False LOC111193140
TU108641 other upstream 3169158 14725927 ~ 14728799 (+) True G80648
TU108374 other upstream 3945759 13925869 ~ 13952198 (+) True LOC103026193
TU109871 other downstream 557292 18460130 ~ 18464096 (+) False LOC103035760
TU109872 other downstream 557292 18460130 ~ 18464096 (+) False LOC103035760
TU109873 other downstream 557292 18460130 ~ 18464096 (+) False LOC103035760
TU109874 other downstream 557292 18460130 ~ 18464096 (+) False LOC103035760
TU109875 other downstream 557292 18460130 ~ 18464096 (+) False LOC103035760

Expression Profile