Item | Value |
---|---|
RNA id | XM_022673164.1 |
length | 1378 |
RNA type | mRNA |
GC content | 0.49 |
exon number | 8 |
gene id | rpp40 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_035905.1 |
NCBI id | CM008308.1 |
chromosome length | 42966623 |
location | 30883308 ~ 30892684 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
species | mexican tetra (Astyanax mexicanus) |
id | description |
---|---|
K14530 | RPP40; ribonucleases P/MRP protein subunit RPP40 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU114307 | lncRNA | upstream | 77566 | 30805201 ~ 30805742 (+) | True | G84877 |
TU114297 | lncRNA | upstream | 112225 | 30770601 ~ 30771083 (+) | True | G84870 |
TU114274 | lncRNA | upstream | 176125 | 30704476 ~ 30707183 (+) | False | G84858 |
TU114276 | lncRNA | upstream | 176125 | 30704476 ~ 30707183 (+) | True | G84858 |
TU114245 | lncRNA | upstream | 194147 | 30686920 ~ 30689161 (+) | True | G84831 |
TU114354 | lncRNA | downstream | 5235 | 30897919 ~ 30899179 (+) | True | G84906 |
TU114313 | lncRNA | downstream | 20199 | 30912883 ~ 30922290 (+) | True | G84881 |
TU114314 | lncRNA | downstream | 20199 | 30912883 ~ 30915338 (+) | False | G84881 |
TU114481 | lncRNA | downstream | 157726 | 31050410 ~ 31050652 (+) | True | G84997 |
TU114482 | lncRNA | downstream | 158143 | 31050827 ~ 31051026 (+) | True | G84998 |
XM_007231620.3 | mRNA | upstream | 136445 | 30713604 ~ 30746863 (+) | True | LOC103037625 |
XM_007231622.3 | mRNA | upstream | 136445 | 30713604 ~ 30746863 (+) | False | LOC103037625 |
XM_007231621.3 | mRNA | upstream | 136445 | 30713604 ~ 30746863 (+) | False | LOC103037625 |
XM_022673150.1 | mRNA | upstream | 136445 | 30713605 ~ 30746863 (+) | False | LOC103037625 |
XM_007231626.3 | mRNA | upstream | 136445 | 30713605 ~ 30746863 (+) | False | LOC103037625 |
XM_007231650.3 | mRNA | downstream | 30285 | 30922969 ~ 30938428 (+) | True | LOC103044961 |
XM_007231651.3 | mRNA | downstream | 49992 | 30942676 ~ 30991541 (+) | True | znf407 |
XM_015600856.2 | mRNA | downstream | 137327 | 31030011 ~ 31049206 (+) | True | tshz1 |
XM_022673168.1 | mRNA | downstream | 260925 | 31153609 ~ 31238682 (+) | True | znf236 |
XM_022673169.1 | mRNA | downstream | 260925 | 31153609 ~ 31238682 (+) | False | znf236 |
LOC107197844 | other | upstream | 1804410 | 29071891 ~ 29078898 (+) | True | LOC107197844 |
LOC111193135 | other | upstream | 1839569 | 29043217 ~ 29043739 (+) | True | LOC111193135 |
LOC111193240 | other | upstream | 1841701 | 29040979 ~ 29041607 (+) | True | LOC111193240 |
TU113562 | other | upstream | 1858194 | 29004094 ~ 29025114 (+) | False | LOC103045392 |
LOC103045392 | other | upstream | 1883202 | 28999502 ~ 29000106 (+) | False | LOC103045392 |
XR_002650381.1 | other | downstream | 562300 | 31454984 ~ 31462260 (+) | False | pnisr |
TU114720 | other | downstream | 930902 | 31823586 ~ 31824388 (+) | True | G85189 |
XR_002650383.1 | other | downstream | 1306499 | 32199183 ~ 32218762 (+) | True | LOC103035447 |
XR_002650384.1 | other | downstream | 1306499 | 32199183 ~ 32215147 (+) | False | LOC103035447 |
XR_002650385.1 | other | downstream | 1307207 | 32199891 ~ 32218762 (+) | False | LOC103035447 |