Item | Value |
---|---|
RNA id | XR_002650303.1 |
length | 656 |
lncRNA type | inter_gene |
GC content | 0.44 |
exon number | 3 |
gene id | LOC111193172 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_035905.1 |
NCBI id | CM008308.1 |
chromosome length | 42966623 |
location | 4278111 ~ 4286231 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
species | mexican tetra (Astyanax mexicanus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU105273 | lncRNA | upstream | 118794 | 4158517 ~ 4159317 (+) | True | G78066 |
TU105276 | lncRNA | upstream | 120246 | 4154743 ~ 4157865 (+) | True | G78068 |
TU105267 | lncRNA | upstream | 163735 | 4081395 ~ 4114376 (+) | True | G78060 |
TU105266 | lncRNA | upstream | 173236 | 4045437 ~ 4104875 (+) | True | G78059 |
TU105265 | lncRNA | upstream | 173658 | 4045437 ~ 4104453 (+) | False | G78059 |
TU105335 | lncRNA | downstream | 31823 | 4318054 ~ 4320327 (+) | True | G78117 |
TU105341 | lncRNA | downstream | 65222 | 4351453 ~ 4353277 (+) | True | G78122 |
TU105402 | lncRNA | downstream | 191635 | 4477866 ~ 4490654 (+) | True | G78172 |
TU105536 | lncRNA | downstream | 918851 | 5205082 ~ 5207413 (+) | True | G78283 |
TU105535 | lncRNA | downstream | 1006524 | 5292755 ~ 5294206 (+) | True | G78282 |
XM_007257898.3 | mRNA | upstream | 266853 | 4007515 ~ 4011258 (+) | True | LOC103044683 |
XM_007257903.3 | mRNA | upstream | 362334 | 3907898 ~ 3915777 (+) | True | ap4s1 |
XM_007257912.3 | mRNA | upstream | 398793 | 3868553 ~ 3879318 (+) | True | coch |
XM_022672611.1 | mRNA | upstream | 419656 | 3853606 ~ 3858455 (+) | True | LOC103022404 |
XM_022672610.1 | mRNA | upstream | 424987 | 3825628 ~ 3853124 (+) | True | scfd1 |
XM_007258890.3 | mRNA | downstream | 12565 | 4298796 ~ 4308409 (+) | True | klhdc1 |
XM_007258891.3 | mRNA | downstream | 24086 | 4310317 ~ 4313788 (+) | True | dnaaf2 |
XM_007258893.3 | mRNA | downstream | 36323 | 4322554 ~ 4329505 (+) | True | klhdc2 |
XM_007258894.2 | mRNA | downstream | 68525 | 4354756 ~ 4364804 (+) | True | mok |
XM_007258895.3 | mRNA | downstream | 69336 | 4355567 ~ 4364804 (+) | False | mok |
trnav-cac_1 | other | upstream | 858112 | 3419927 ~ 3419999 (+) | True | trnav-cac_1 |
trnav-aac_3 | other | upstream | 861200 | 3416839 ~ 3416911 (+) | True | trnav-aac_3 |
trnav-aac_2 | other | upstream | 861871 | 3416168 ~ 3416240 (+) | True | trnav-aac_2 |
TU104827 | other | upstream | 1300017 | 2900134 ~ 2978094 (+) | True | G77722 |
TU105324 | other | downstream | 3276 | 4289507 ~ 4298184 (+) | True | G78111 |
TU105595 | other | downstream | 1165884 | 5452115 ~ 5527965 (+) | False | LOC103025550 |
TU105776 | other | downstream | 2571178 | 6857409 ~ 6861157 (+) | False | LOC103024862 |
TU106040 | other | downstream | 3308476 | 7594707 ~ 7607664 (+) | True | G78671 |
TU106110 | other | downstream | 3370098 | 7656329 ~ 7670774 (+) | False | fam167b |