Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002650327.1 |
| length | 358 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 2 |
| gene id | LOC111193197 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 11546280 ~ 11546774 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002650326.1 | lncRNA | upstream | 263 | 11544676 ~ 11546017 (+) | True | LOC111193196 |
| TU107312 | lncRNA | upstream | 9957 | 11535792 ~ 11536323 (+) | True | G79643 |
| TU107308 | lncRNA | upstream | 13416 | 11532334 ~ 11532864 (+) | True | G79640 |
| TU107307 | lncRNA | upstream | 14130 | 11531898 ~ 11532150 (+) | True | G79639 |
| TU107306 | lncRNA | upstream | 14473 | 11531557 ~ 11531807 (+) | True | G79638 |
| TU107328 | lncRNA | downstream | 13006 | 11559780 ~ 11560109 (+) | True | G79659 |
| TU107359 | lncRNA | downstream | 145042 | 11691816 ~ 11692164 (+) | True | G79683 |
| TU107360 | lncRNA | downstream | 153906 | 11700680 ~ 11702374 (+) | True | G79684 |
| TU107370 | lncRNA | downstream | 200270 | 11747044 ~ 11747579 (+) | True | G79692 |
| TU107373 | lncRNA | downstream | 226916 | 11773690 ~ 11784149 (+) | True | G79694 |
| XM_007238735.3 | mRNA | upstream | 731366 | 10801357 ~ 10814914 (+) | True | fam98a |
| XM_007238106.3 | mRNA | upstream | 781566 | 10727848 ~ 10764714 (+) | True | LOC103024809 |
| XM_022672473.1 | mRNA | upstream | 879606 | 10664458 ~ 10666674 (+) | True | LOC111193128 |
| XM_007238109.3 | mRNA | upstream | 993072 | 10538079 ~ 10553208 (+) | False | LOC103025860 |
| XM_022672688.1 | mRNA | upstream | 1184464 | 10352414 ~ 10361816 (+) | False | LOC103027561 |
| XM_022672726.1 | mRNA | downstream | 30465 | 11577239 ~ 11637984 (+) | True | LOC103032219 |
| XM_007242500.2 | mRNA | downstream | 263459 | 11810233 ~ 11823175 (+) | True | pex13 |
| XM_022672727.1 | mRNA | downstream | 339462 | 11886236 ~ 11962874 (+) | True | kiaa1841 |
| XM_022672723.1 | mRNA | downstream | 456019 | 12002793 ~ 12040710 (+) | False | LOC103021592 |
| XM_022672721.1 | mRNA | downstream | 456020 | 12002794 ~ 12040710 (+) | True | LOC103021592 |
| TU107028 | other | upstream | 732810 | 10807371 ~ 10813470 (+) | False | fam98a |
| XR_002650310.1 | other | upstream | 1991752 | 9495449 ~ 9554528 (+) | False | spata17 |
| TU106242 | other | upstream | 2996312 | 8542128 ~ 8549968 (+) | False | G78817 |
| TU106236 | other | upstream | 2996312 | 8543185 ~ 8549968 (+) | False | G78817 |
| TU106244 | other | upstream | 3008598 | 8535916 ~ 8537682 (+) | True | G78818 |
| TU107323 | other | downstream | 7908 | 11554682 ~ 11555139 (+) | True | G79654 |
| TU107406 | other | downstream | 354321 | 11901095 ~ 11905385 (+) | True | G79717 |
| TU107455 | other | downstream | 518070 | 12064844 ~ 12076211 (+) | True | G79761 |
| TU108374 | other | downstream | 2379095 | 13925869 ~ 13952198 (+) | True | LOC103026193 |
| TU108641 | other | downstream | 3179153 | 14725927 ~ 14728799 (+) | True | G80648 |
