Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU293728 |
| length | 880 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G216435 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035921.1 |
| NCBI id | CM008324.1 |
| chromosome length | 46505145 |
| location | 14402585 ~ 14403464 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU293688 | lncRNA | upstream | 47766 | 14353101 ~ 14354819 (+) | True | G216410 |
| TU293686 | lncRNA | upstream | 50672 | 14351568 ~ 14351913 (+) | True | G216408 |
| TU293685 | lncRNA | upstream | 55260 | 14347261 ~ 14347325 (+) | False | gsto1 |
| TU293618 | lncRNA | upstream | 137236 | 14255407 ~ 14265349 (+) | True | G216354 |
| TU293619 | lncRNA | upstream | 139901 | 14259343 ~ 14262684 (+) | True | G216355 |
| TU293730 | lncRNA | downstream | 28645 | 14432109 ~ 14440403 (+) | True | G216437 |
| TU293732 | lncRNA | downstream | 28645 | 14432109 ~ 14474597 (+) | False | G216437 |
| TU293738 | lncRNA | downstream | 84295 | 14487759 ~ 14488523 (+) | True | G216441 |
| TU293813 | lncRNA | downstream | 210682 | 14614146 ~ 14616451 (+) | True | G216505 |
| TU293816 | lncRNA | downstream | 213854 | 14617318 ~ 14618083 (+) | True | G216508 |
| XM_007252253.3 | mRNA | upstream | 7517 | 14382714 ~ 14395068 (+) | True | LOC103031627 |
| XM_015606623.2 | mRNA | upstream | 8724 | 14382712 ~ 14393861 (+) | False | LOC103031627 |
| XM_015606622.2 | mRNA | upstream | 8724 | 14382713 ~ 14393861 (+) | False | LOC103031627 |
| XM_022684679.1 | mRNA | upstream | 23411 | 14373831 ~ 14379174 (+) | True | calhm2 |
| XM_007252277.3 | mRNA | upstream | 29758 | 14367304 ~ 14372827 (+) | True | LOC103038684 |
| XM_007252276.3 | mRNA | downstream | 6631 | 14410095 ~ 14411423 (+) | True | atoh7 |
| XM_007252252.3 | mRNA | downstream | 15505 | 14418969 ~ 14430741 (+) | True | LOC103031316 |
| XM_022684677.1 | mRNA | downstream | 15505 | 14418969 ~ 14430741 (+) | False | LOC103031316 |
| XM_007252251.3 | mRNA | downstream | 39212 | 14442676 ~ 14450871 (+) | True | bag3 |
| XM_007252248.3 | mRNA | downstream | 50552 | 14454016 ~ 14479060 (+) | True | inpp5f |
| trnat-ugu_90 | other | upstream | 1054952 | 13347561 ~ 13347633 (+) | True | trnat-ugu_90 |
| trnay-gua_11 | other | upstream | 1086423 | 13316075 ~ 13316162 (+) | True | trnay-gua_11 |
| trnay-gua_10 | other | upstream | 1087385 | 13315112 ~ 13315200 (+) | True | trnay-gua_10 |
| TU293202 | other | upstream | 1298543 | 13091746 ~ 13104042 (+) | True | G216053 |
| TU292989 | other | upstream | 1686680 | 12710638 ~ 12715905 (+) | True | G215886 |
| TU294489 | other | downstream | 2601131 | 17004595 ~ 17007537 (+) | True | borcs7 |
| XR_002651919.1 | other | downstream | 2763554 | 17167018 ~ 17175733 (+) | False | LOC111195981 |
| TU294912 | other | downstream | 3908442 | 18311906 ~ 18316824 (+) | False | eif4ebp2 |
| TU294985 | other | downstream | 4339769 | 18743233 ~ 18744231 (+) | False | LOC103030769 |
| TU295009 | other | downstream | 4433898 | 18837362 ~ 18847028 (+) | False | cxcl12 |
