RNA id: XM_022684917.1


Basic Information

Item Value
RNA id XM_022684917.1
length 994
RNA type mRNA
GC content 0.47
exon number 7
gene id dapp1
representative True

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 25161727 ~ 25174708 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

CTGATGGAAAACATGATAGAATATTAGCAcgatttttttaagcattttgcaCACCATTGCTCATCCTGTAGTTCACTGAGAAGCATGTAACTGTCTGAGTAACTCAcgcccctcccccctcccctgTCTGTTATCGTGGGCGTGTCCACAGCttcctcttctgctgctgttggtaAATCCTCTCTGAGGACTGTTCAGAGCCAGGCTTTTCTAGAGGAGATACAGCAGTTCTGCTCCAGATATGAGTGTGGGCAGCTCCAACCGCAGCTTCGGAGAGGAGGTGGATGAGCTGGAGACAGTGGGttGGTACCATTATGAACTGTCTCGCCATGCTGCTGAAGCCCTGCTCATGTCTAATGGTGTCGATGGGAGTTTTCTGCTGAGAAACAGCAATAAGGGACCTGAATGCTTTGCCCTTTCTGTAAGGGCAAAGGACTCAGTGAAGCACTTCCATGTGCGCCGGCAGTTTGGCAGGTATTCTTTTGGCTTCAATGAGTTTGCCACCCTTCAGGACTTCACCAGTCACCTGGCCAATCAGCCACTACTGGGGAGCGAGACAGGTAATCTGATAGTGTTGAGGTTCCCGTATCCACGCCAGGTGGAGGAACCTTCTATCTAcgagtctgtgtgtgttcacacGGCCATGCAGACCGGACGCCATGAAAGCGACCTTGTCCCCAGCGCTCCATCActtGGTACAAAGGAGGGCTATCTGGTAAAACAAGGAGCTATTGTAAAGAATTGGAAACAGAGGTGGTTCACATTGAACCGTAATGAGCTGAAATACTTCAAAGACAAAATGGTACcacacacactgcagattatTTTATCAGCTGTatgtaactttatttatttatttatttattttgtctcttttcCATGTTACAGTTTAGTCTTTCCTGAGAGGACGTTTTATCTGTGTGCTAAATCTGGCGTGGAAGCTGACGAATGGATAAAGATACTACGCTGGAAACTGGTAAGGACAGCAAATTAA

Function

GO: NA

KEGG:

id description
K12229 DAPP1, BAM32; dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU297338 lncRNA upstream 22780 25133953 ~ 25138947 (+) False G219141
TU297340 lncRNA upstream 25664 25133953 ~ 25136063 (+) True G219141
TU297295 lncRNA upstream 76871 25084457 ~ 25084856 (+) True G219102
TU297267 lncRNA upstream 119938 25041237 ~ 25041789 (+) True G219074
TU297262 lncRNA upstream 152198 25009141 ~ 25009529 (+) True G219069
TU297353 lncRNA downstream 3945 25178653 ~ 25187678 (+) True G219144
TU297352 lncRNA downstream 6737 25181445 ~ 25181983 (+) False G219144
TU297359 lncRNA downstream 18200 25192908 ~ 25194235 (+) True G219150
TU297362 lncRNA downstream 20079 25194787 ~ 25198276 (+) True G219151
TU297366 lncRNA downstream 29326 25204034 ~ 25208010 (+) True G219153
XM_015602442.2 mRNA upstream 363128 24794890 ~ 24798599 (+) True ap5s1
XM_007237253.3 mRNA upstream 363128 24795057 ~ 24798599 (+) False ap5s1
XM_007237254.3 mRNA upstream 374387 24779609 ~ 24787340 (+) True cdc25b
XM_022684969.1 mRNA upstream 483614 24658431 ~ 24678113 (+) True LOC103045503
XM_022684970.1 mRNA upstream 483614 24658431 ~ 24678113 (+) False LOC103045503
XM_022684918.1 mRNA downstream 9926 25184634 ~ 25192379 (+) True rrh
XM_007237999.3 mRNA downstream 51733 25226441 ~ 25241001 (+) True metap1
XM_007238000.3 mRNA downstream 51733 25226441 ~ 25241001 (+) False metap1
XM_007237991.3 mRNA downstream 136135 25310843 ~ 25315607 (+) True LOC103043156
XM_022684920.1 mRNA downstream 137625 25312333 ~ 25315607 (+) False LOC103043156
TU297241 other upstream 319194 24842302 ~ 24842533 (+) True G219050
TU296854 other upstream 1097939 24059211 ~ 24063788 (+) True G218758
TU296687 other upstream 1453484 23696577 ~ 23708243 (+) True G218651
TU296278 other upstream 2942867 22217299 ~ 22218860 (+) True G218351
TU296281 other upstream 2942867 22218117 ~ 22218860 (+) False G218351
TU297390 other downstream 82242 25256950 ~ 25302587 (+) True G219171
XR_002651962.1 other downstream 2050584 27225292 ~ 27236611 (+) False LOC111196018
XR_002651965.1 other downstream 2055449 27230157 ~ 27236611 (+) False LOC111196018
XR_002651959.1 other downstream 2055451 27230159 ~ 27236611 (+) False LOC111196018
XR_002651961.1 other downstream 2055452 27230160 ~ 27236611 (+) False LOC111196018

Expression Profile