Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002651980.1 |
| length | 802 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | LOC111196033 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035921.1 |
| NCBI id | CM008324.1 |
| chromosome length | 46505145 |
| location | 33371506 ~ 33374468 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU300126 | lncRNA | upstream | 58903 | 33290534 ~ 33312603 (+) | True | G221217 |
| TU300125 | lncRNA | upstream | 81633 | 33287419 ~ 33289873 (+) | True | G221216 |
| TU300107 | lncRNA | upstream | 121136 | 33246592 ~ 33250370 (+) | True | G221198 |
| TU300086 | lncRNA | upstream | 138838 | 33213649 ~ 33232668 (+) | False | bcl2l11 |
| TU300061 | lncRNA | upstream | 213466 | 33153108 ~ 33158040 (+) | False | G221168 |
| TU300221 | lncRNA | downstream | 88716 | 33463184 ~ 33463392 (+) | True | G221298 |
| TU300231 | lncRNA | downstream | 118441 | 33492909 ~ 33494218 (+) | True | G221308 |
| TU300238 | lncRNA | downstream | 141184 | 33515652 ~ 33516194 (+) | True | G221315 |
| TU300249 | lncRNA | downstream | 254978 | 33629446 ~ 33629680 (+) | True | G221321 |
| TU300252 | lncRNA | downstream | 257618 | 33632086 ~ 33636648 (+) | True | G221324 |
| XM_007228745.3 | mRNA | upstream | 138715 | 33213628 ~ 33232791 (+) | True | bcl2l11 |
| XM_022685010.1 | mRNA | upstream | 160769 | 33109959 ~ 33210737 (+) | True | acoxl |
| XM_022685007.1 | mRNA | upstream | 397938 | 32946416 ~ 32973568 (+) | True | fbln7 |
| XM_022685005.1 | mRNA | upstream | 449928 | 32911781 ~ 32921578 (+) | True | LOC111196032 |
| XM_007228747.3 | mRNA | downstream | 80308 | 33454776 ~ 33458782 (+) | True | LOC103021727 |
| XM_022684765.1 | mRNA | downstream | 1419615 | 34794083 ~ 34829457 (+) | True | LOC103021397 |
| XM_007247598.3 | mRNA | downstream | 1470026 | 34844494 ~ 34858483 (+) | True | l2hgdh |
| XM_007247596.3 | mRNA | downstream | 1488670 | 34863138 ~ 34892584 (+) | True | sos2 |
| XM_007247593.3 | mRNA | downstream | 1551816 | 34926284 ~ 34932635 (+) | True | cdkn3 |
| XR_002651979.1 | other | upstream | 694221 | 32613474 ~ 32677285 (+) | False | LOC103038412 |
| TU299723 | other | upstream | 792954 | 32535056 ~ 32578552 (+) | False | LOC103027057 |
| TU299570 | other | upstream | 1633310 | 31736897 ~ 31738196 (+) | True | G220800 |
| trnak-cuu_13 | other | upstream | 1943194 | 31428240 ~ 31428312 (+) | True | trnak-cuu_13 |
| trnag-gcc_5 | other | upstream | 1948684 | 31422752 ~ 31422822 (+) | True | trnag-gcc_5 |
| TU300211 | other | downstream | 69649 | 33444117 ~ 33444721 (+) | True | G221292 |
| TU300330 | other | downstream | 788113 | 34162581 ~ 34183237 (+) | True | G221390 |
| TU300434 | other | downstream | 1612560 | 34987028 ~ 34997044 (+) | True | synj2bp |
| TU300438 | other | downstream | 1643985 | 35018453 ~ 35025598 (+) | True | srsf5 |
| XR_002651984.1 | other | downstream | 2495550 | 35870018 ~ 35888815 (+) | True | gclc |
