Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU300393 |
| length | 860 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 1 |
| gene id | G221420 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035921.1 |
| NCBI id | CM008324.1 |
| chromosome length | 46505145 |
| location | 34904778 ~ 34905637 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU300413 | lncRNA | upstream | 6462 | 34895461 ~ 34898316 (+) | True | G221438 |
| TU300395 | lncRNA | upstream | 67426 | 34836961 ~ 34837352 (+) | True | G221422 |
| TU300391 | lncRNA | upstream | 68918 | 34830093 ~ 34835860 (+) | True | G221419 |
| TU300392 | lncRNA | upstream | 68918 | 34830517 ~ 34835860 (+) | False | G221419 |
| TU300315 | lncRNA | upstream | 887635 | 34013515 ~ 34017143 (+) | True | G221377 |
| TU300416 | lncRNA | downstream | 1136 | 34906773 ~ 34907405 (+) | True | G221441 |
| TU300420 | lncRNA | downstream | 12934 | 34918571 ~ 34918853 (+) | True | G221445 |
| TU300421 | lncRNA | downstream | 15700 | 34921337 ~ 34921649 (+) | True | G221446 |
| TU300412 | lncRNA | downstream | 27343 | 34932980 ~ 34933285 (+) | True | G221437 |
| TU300410 | lncRNA | downstream | 52258 | 34957895 ~ 34966227 (+) | True | G221436 |
| XM_007247596.3 | mRNA | upstream | 12194 | 34863138 ~ 34892584 (+) | True | sos2 |
| XM_007247598.3 | mRNA | upstream | 46295 | 34844494 ~ 34858483 (+) | True | l2hgdh |
| XM_022684765.1 | mRNA | upstream | 75321 | 34794083 ~ 34829457 (+) | True | LOC103021397 |
| XM_007228747.3 | mRNA | upstream | 1445996 | 33454776 ~ 33458782 (+) | True | LOC103021727 |
| XM_007228745.3 | mRNA | upstream | 1671987 | 33213628 ~ 33232791 (+) | True | bcl2l11 |
| XM_007247593.3 | mRNA | downstream | 20647 | 34926284 ~ 34932635 (+) | True | cdkn3 |
| XM_007247590.3 | mRNA | downstream | 63587 | 34969224 ~ 34979881 (+) | True | LOC103035732 |
| XM_022685019.1 | mRNA | downstream | 63587 | 34969224 ~ 34979881 (+) | False | LOC103035732 |
| XM_007247587.3 | mRNA | downstream | 81362 | 34986999 ~ 34996711 (+) | False | synj2bp |
| XM_007247588.3 | mRNA | downstream | 96568 | 35002205 ~ 35014129 (+) | True | LOC103035102 |
| TU300330 | other | upstream | 721541 | 34162581 ~ 34183237 (+) | True | G221390 |
| TU300211 | other | upstream | 1460057 | 33444117 ~ 33444721 (+) | True | G221292 |
| XR_002651979.1 | other | upstream | 2227493 | 32613474 ~ 32677285 (+) | False | LOC103038412 |
| TU299723 | other | upstream | 2326226 | 32535056 ~ 32578552 (+) | False | LOC103027057 |
| TU299570 | other | upstream | 3166582 | 31736897 ~ 31738196 (+) | True | G220800 |
| TU300434 | other | downstream | 81391 | 34987028 ~ 34997044 (+) | True | synj2bp |
| TU300438 | other | downstream | 112816 | 35018453 ~ 35025598 (+) | True | srsf5 |
| XR_002651984.1 | other | downstream | 964381 | 35870018 ~ 35888815 (+) | True | gclc |
| XR_002651983.1 | other | downstream | 965423 | 35871060 ~ 35888815 (+) | False | gclc |
| TU300860 | other | downstream | 1064352 | 35969989 ~ 35972354 (+) | True | G221728 |
