RNA id: TU95132



Basic Information


Item Value
RNA id TU95132
length 209
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id G70508
representative True

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 1115927 ~ 1117269 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


gggggtcgATGCTTGGtggctggagtctataccagcTGGCATCGGGctgaaggcagtatacaccctggacaggatgccaatccatcacagggcagacagacacagacagacacacagacacattcactcacacctaaggggcaatttttatccgacatctAATTAGCCTGAACTAatttctttggactgtgggaggaaaccggagcacc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95122 lncRNA downstream 27783 1087843 ~ 1088144 (-) True G70502
TU95110 lncRNA downstream 80921 1032889 ~ 1035006 (-) False LOC103042850
TU95109 lncRNA downstream 94935 1020735 ~ 1020992 (-) True G70489
TU95096 lncRNA downstream 201678 913078 ~ 914249 (-) True G70477
TU95073 lncRNA downstream 262322 845038 ~ 853605 (-) True G70457
TU95137 lncRNA upstream 28514 1145783 ~ 1146014 (-) True G70512
TU95140 lncRNA upstream 46934 1164203 ~ 1164470 (-) True G70515
TU95146 lncRNA upstream 150699 1267968 ~ 1268442 (-) True G70521
TU95151 lncRNA upstream 171604 1288873 ~ 1289120 (-) True G70526
TU95153 lncRNA upstream 180440 1297709 ~ 1298029 (-) True G70528
XM_022671899.1 mRNA downstream 80911 1009886 ~ 1035016 (-) True LOC103042850
XM_022671898.1 mRNA downstream 110050 988446 ~ 1005877 (-) True LOC103041113
XM_015603201.2 mRNA downstream 133324 975095 ~ 982603 (-) True rps5
XM_015603200.2 mRNA downstream 133346 975095 ~ 982581 (-) False rps5
XM_022671888.1 mRNA downstream 177743 932017 ~ 938184 (-) True LOC111193040
XM_022671943.1 mRNA upstream 880887 1998156 ~ 2220364 (-) True LOC103026956
XM_022671944.1 mRNA upstream 1318411 2435680 ~ 2488996 (-) True LOC103026657
XM_022671945.1 mRNA upstream 1383719 2500988 ~ 2535981 (-) True LOC103022920
XM_007257740.3 mRNA upstream 1544242 2661511 ~ 2678905 (-) False dctn4
XM_007257739.3 mRNA upstream 1544242 2661511 ~ 2678905 (-) True dctn4
TU95334 other upstream 1618599 2735868 ~ 2745072 (-) False tnip1
TU95670 other upstream 2230531 3347800 ~ 3353599 (-) True G70924
TU95798 other upstream 2651892 3769161 ~ 3807099 (-) False LOC103042226
TU96020 other upstream 3294679 4411948 ~ 4413011 (-) True G71175
TU96095 other upstream 3764901 4882170 ~ 4884488 (-) True G71235

Expression Profile