RNA id: TU95247



Basic Information


Item Value
RNA id TU95247
length 419
lncRNA type inter_gene
GC content 0.61
exon number 1
gene id G70605
representative True

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2358811 ~ 2359229 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


CAGGTTCAGCACGTAGATATCCGACACCATCTTCTTCTTACAGGTGGCCACGGCGTAGATCACCAGGCTGTTGGCGAGCACGCCCACGGAGCACAGCACGCCGTACACCGTGGGGAAGATGTGCATGAAGGACGCGGCGTCTATCGGGCTGACCGCGGAGCCGGTCCGGTTCACACACAGCGAGCCGTTCACCAGAACCTCCCCGGACCCGCACAGCCCGTCCGACCCGTTCATCCTGCTCTATAACCGGCTATCAGAACACAGCGGAACCGCGCGACTCTCCCCAGCGACTCCGGTTACCGAGCATACTTTACAATCCGCTACACTGCTGTTCCTCTCAGTGCGCTTCTGACCGCGCGCGTGTGTTTTAAGAGTGCGCGCGCGCCCGTGCGtgtgtttttagtgtgtgtgtgagagag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95238 lncRNA downstream 11959 2311285 ~ 2346852 (-) True G70597
TU95244 lncRNA downstream 11985 2331296 ~ 2346826 (-) True G70602
TU95239 lncRNA downstream 36105 2313796 ~ 2322706 (-) True G70598
TU95213 lncRNA downstream 121296 2237299 ~ 2237515 (-) True G70579
TU95212 lncRNA downstream 127867 2230491 ~ 2230944 (-) True G70578
TU95271 lncRNA upstream 22088 2381317 ~ 2384167 (-) True G70624
TU95275 lncRNA upstream 44182 2403411 ~ 2403865 (-) True G70628
TU95278 lncRNA upstream 60330 2419559 ~ 2434902 (-) False G70629
TU95291 lncRNA upstream 64807 2424036 ~ 2432368 (-) True G70632
TU95292 lncRNA upstream 64807 2424036 ~ 2455464 (-) False G70632
XM_022671943.1 mRNA downstream 138447 1998156 ~ 2220364 (-) True LOC103026956
XM_022671899.1 mRNA downstream 1323795 1009886 ~ 1035016 (-) True LOC103042850
XM_022671898.1 mRNA downstream 1352934 988446 ~ 1005877 (-) True LOC103041113
XM_015603201.2 mRNA downstream 1376208 975095 ~ 982603 (-) True rps5
XM_022671944.1 mRNA upstream 76451 2435680 ~ 2488996 (-) True LOC103026657
XM_022671945.1 mRNA upstream 141759 2500988 ~ 2535981 (-) True LOC103022920
XM_007257740.3 mRNA upstream 302282 2661511 ~ 2678905 (-) False dctn4
XM_007257739.3 mRNA upstream 302282 2661511 ~ 2678905 (-) True dctn4
XM_022671946.1 mRNA upstream 344966 2704195 ~ 2742373 (-) True tnip1
TU95334 other upstream 376639 2735868 ~ 2745072 (-) False tnip1
TU95670 other upstream 988571 3347800 ~ 3353599 (-) True G70924
TU95798 other upstream 1409932 3769161 ~ 3807099 (-) False LOC103042226
TU96020 other upstream 2052719 4411948 ~ 4413011 (-) True G71175
TU96095 other upstream 2522941 4882170 ~ 4884488 (-) True G71235

Expression Profile