RNA id: TU95376



Basic Information


Item Value
RNA id TU95376
length 218
lncRNA type intronic
GC content 0.34
exon number 2
gene id G70691
representative True

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2766605 ~ 2766880 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


accctttataaaggtagtcttattttttaaagtggtaccaaaatatataataataataataataataatataaaatgcctctctggccagattttgtttacatacctcccctgtctctctctgttgcgctctGCGTGACTTTCATTTCCACCTGTTCTTGTTTTACCGCctgttctcgggctccctatctccttataaagaaagtttattcatttatt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95355 lncRNA downstream 8771 2757143 ~ 2757834 (-) True G70673
TU95344 lncRNA downstream 62900 2638562 ~ 2703705 (-) True G70666
TU95353 lncRNA downstream 65471 2673139 ~ 2701134 (-) False G70672
TU95354 lncRNA downstream 65471 2690755 ~ 2701134 (-) True G70672
TU95352 lncRNA downstream 65471 2691928 ~ 2701134 (-) False G70672
TU95390 lncRNA upstream 83070 2849950 ~ 2850374 (-) True G70703
TU95415 lncRNA upstream 113044 2879924 ~ 2880124 (-) True G70728
TU95417 lncRNA upstream 115602 2882482 ~ 2882965 (-) True G70730
TU95420 lncRNA upstream 153162 2920042 ~ 2920385 (-) True G70733
TU95422 lncRNA upstream 174173 2941053 ~ 2941636 (-) True G70735
XM_022671946.1 mRNA downstream 24232 2704195 ~ 2742373 (-) True tnip1
XM_007257740.3 mRNA downstream 87700 2661511 ~ 2678905 (-) False dctn4
XM_007257739.3 mRNA downstream 87700 2661511 ~ 2678905 (-) True dctn4
XM_022671945.1 mRNA downstream 230624 2500988 ~ 2535981 (-) True LOC103022920
XM_022671944.1 mRNA downstream 277609 2435680 ~ 2488996 (-) True LOC103026657
XM_022671952.1 mRNA upstream 8363 2775243 ~ 2816535 (-) False anxa6
XM_007257737.3 mRNA upstream 191769 2958649 ~ 2982646 (-) True rmnd5b
XM_022671901.1 mRNA upstream 215167 2982047 ~ 3019753 (-) True LOC103025117
XM_007257736.3 mRNA upstream 256539 3023419 ~ 3027693 (-) True LOC103047641
XM_007257732.3 mRNA upstream 531330 3298210 ~ 3317552 (-) False tmem65
TU95334 other downstream 21533 2735868 ~ 2745072 (-) False tnip1
TU95670 other upstream 580920 3347800 ~ 3353599 (-) True G70924
TU95798 other upstream 1002281 3769161 ~ 3807099 (-) False LOC103042226
TU96020 other upstream 1645068 4411948 ~ 4413011 (-) True G71175
TU96095 other upstream 2115290 4882170 ~ 4884488 (-) True G71235
trnaw-cca_42 other upstream 2157120 4924000 ~ 4924071 (-) True trnaw-cca_42

Expression Profile