RNA id: TU95513



Basic Information


Item Value
RNA id TU95513
length 206
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G70812
representative True

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 3116884 ~ 3117089 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


ttaagagaccacttaaaaatgatgagttactttgattttaccaaattgaaaacctctggaacataatcaagaggaagatggatgatcacaaggcatcaaaccaagctgaactgctagaatttttgcaccaggagtgtgcataaatgttatccaaaagcagtgtgtaagactggtggagaactcttaaaactttatggatataaact

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95510 lncRNA downstream 889 3110805 ~ 3115995 (-) True G70809
TU95495 lncRNA downstream 33679 3082976 ~ 3083205 (-) True G70795
TU95466 lncRNA downstream 160710 2954612 ~ 2956174 (-) True G70769
TU95468 lncRNA downstream 164967 2951573 ~ 2951917 (-) True G70771
TU95467 lncRNA downstream 166981 2947441 ~ 2949903 (-) True G70770
TU95668 lncRNA upstream 160387 3277476 ~ 3291961 (-) True G70923
TU95669 lncRNA upstream 163067 3280156 ~ 3353599 (-) False G70924
TU95673 lncRNA upstream 188430 3305519 ~ 3306018 (-) True G70926
TU95674 lncRNA upstream 192363 3309452 ~ 3309851 (-) True G70927
TU95685 lncRNA upstream 297499 3414588 ~ 3415039 (-) True G70938
XM_007257736.3 mRNA downstream 89191 3023419 ~ 3027693 (-) True LOC103047641
XM_022671901.1 mRNA downstream 97131 2982047 ~ 3019753 (-) True LOC103025117
XM_007257737.3 mRNA downstream 134238 2958649 ~ 2982646 (-) True rmnd5b
XM_022671952.1 mRNA downstream 300349 2775243 ~ 2816535 (-) False anxa6
XM_022671951.1 mRNA downstream 300350 2764522 ~ 2816534 (-) False anxa6
XM_007257732.3 mRNA upstream 181121 3298210 ~ 3317552 (-) False tmem65
XM_022671966.1 mRNA upstream 181121 3298210 ~ 3317552 (-) True tmem65
XM_007257731.3 mRNA upstream 206809 3323898 ~ 3335786 (-) True rnf139
XM_007257730.3 mRNA upstream 219120 3336209 ~ 3346476 (-) True tatdn1
XM_022671968.1 mRNA upstream 245482 3362571 ~ 3407431 (-) True mtss1
TU95334 other downstream 371812 2735868 ~ 2745072 (-) False tnip1
TU95670 other upstream 230711 3347800 ~ 3353599 (-) True G70924
TU95798 other upstream 652072 3769161 ~ 3807099 (-) False LOC103042226
TU96020 other upstream 1294859 4411948 ~ 4413011 (-) True G71175
TU96095 other upstream 1765081 4882170 ~ 4884488 (-) True G71235
trnaw-cca_42 other upstream 1806911 4924000 ~ 4924071 (-) True trnaw-cca_42

Expression Profile