RNA id: TU95724



Basic Information


Item Value
RNA id TU95724
length 421
lncRNA type inter_gene
GC content 0.43
exon number 3
gene id G70965
representative True

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 3598084 ~ 3599084 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


cagagttcatcactacacacctccaaacttcatgtagcttcagcagagttcatcactacacacctccaaacttcatgtagcttcagagttcatcactacacacctccaaacttcatgtagcttcagagttcatcactacacacctccaaacttcatgtagcttcagagttcatcactacacacctccaaacttcatgtagcttcagagttcatcactacacacctccaaacttcatgtagcttcagcagagttcatcactacacacctccaaacttcatgtagcttcagcagagttcatcactacacacctccaaacttcatgtagcttcagcagagttcatcactacacacctccaaacttcatgtagcttcagattagttcatcactacacacctccaaacttcatgtagcttcagatt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95712 lncRNA downstream 13443 3515038 ~ 3584641 (-) True G70955
TU95707 lncRNA downstream 75697 3459881 ~ 3522387 (-) True G70951
TU95705 lncRNA downstream 139286 3457819 ~ 3458798 (-) False LOC111193045
TU95701 lncRNA downstream 142860 3454877 ~ 3455224 (-) True G70947
TU95699 lncRNA downstream 146472 3450905 ~ 3451612 (-) True G70946
TU95721 lncRNA upstream 35196 3634280 ~ 3641649 (-) False LOC103023864
TU95739 lncRNA upstream 91231 3690315 ~ 3711137 (-) True G70979
TU95818 lncRNA upstream 211181 3810265 ~ 3811074 (-) False LOC103042226
TU95819 lncRNA upstream 211181 3810265 ~ 3811966 (-) False LOC103042226
TU95827 lncRNA upstream 266700 3865784 ~ 3938383 (-) True G71040
XM_022671975.1 mRNA downstream 89088 3461237 ~ 3508996 (-) True LOC103024174
XM_022671902.1 mRNA downstream 139274 3444095 ~ 3458810 (-) True LOC111193045
XM_022671969.1 mRNA downstream 190664 3362571 ~ 3407420 (-) False mtss1
XM_022671976.1 mRNA upstream 34632 3633716 ~ 3641881 (-) True LOC103023864
XM_022671903.1 mRNA upstream 137542 3736626 ~ 3848624 (-) True LOC103042226
XM_022671978.1 mRNA upstream 263034 3862118 ~ 3910529 (-) False LOC103042532
XM_022671977.1 mRNA upstream 263034 3862118 ~ 3910529 (-) True LOC103042532
XM_007236447.3 mRNA upstream 848088 4447172 ~ 4462972 (-) True LOC103026470
TU95670 other downstream 244485 3347800 ~ 3353599 (-) True G70924
TU95334 other downstream 853012 2735868 ~ 2745072 (-) False tnip1
TU95798 other upstream 170077 3769161 ~ 3807099 (-) False LOC103042226
TU96020 other upstream 812864 4411948 ~ 4413011 (-) True G71175
TU96095 other upstream 1283086 4882170 ~ 4884488 (-) True G71235
trnaw-cca_42 other upstream 1324916 4924000 ~ 4924071 (-) True trnaw-cca_42
TU96400 other upstream 1872582 5471666 ~ 5476375 (-) True G71458

Expression Profile