RNA id: TU95739


Basic Information

Item Value
RNA id TU95739
length 497
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G70979
representative True

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 3690315 ~ 3711137 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ggggccagaaggagaaatttatttgaagtcacgggccacactctgtaataaaacaaataatgaaatataccactttaattaatactttttcctgattatttcatttacacaccattttacttgacttactatctttatctttgacagtgttgtataaactaagatttttcatgatgtctcttaatattaaactccttaattacggcaacttttagactctttggccccttttctgtgctagaaatgcacactctctccacttttagactcttttacccagtttttctgcgctagaaatgcacactctctccacttttagactcttttacccagtttttctgcgctagaaatgcgcactctctccgcttttagactcttttacccagtttttctgcgctagaaatgcgcactctctccacttttagactcttttacccagtttttctgcgctagaaatgcgcactctctccgcttttagactctttggcccgtttttc

Function

GO: NA

KEGG:

id description
ko05032 Morphine addiction

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU95721 lncRNA downstream 48666 3634280 ~ 3641649 (-) False LOC103023864
TU95724 lncRNA downstream 91231 3598084 ~ 3599084 (-) True G70965
TU95712 lncRNA downstream 105674 3515038 ~ 3584641 (-) True G70955
TU95707 lncRNA downstream 167928 3459881 ~ 3522387 (-) True G70951
TU95705 lncRNA downstream 231517 3457819 ~ 3458798 (-) False LOC111193045
TU95818 lncRNA upstream 99128 3810265 ~ 3811074 (-) False LOC103042226
TU95819 lncRNA upstream 99128 3810265 ~ 3811966 (-) False LOC103042226
TU95827 lncRNA upstream 154647 3865784 ~ 3938383 (-) True G71040
TU95864 lncRNA upstream 389093 4100230 ~ 4108878 (-) True G71067
TU95867 lncRNA upstream 395484 4106621 ~ 4108878 (-) False G71067
XM_022671976.1 mRNA downstream 48434 3633716 ~ 3641881 (-) True LOC103023864
XM_022671975.1 mRNA downstream 181319 3461237 ~ 3508996 (-) True LOC103024174
XM_022671902.1 mRNA downstream 231505 3444095 ~ 3458810 (-) True LOC111193045
XM_022671969.1 mRNA downstream 282895 3362571 ~ 3407420 (-) False mtss1
XM_022671903.1 mRNA upstream 25489 3736626 ~ 3848624 (-) True LOC103042226
XM_022671978.1 mRNA upstream 150981 3862118 ~ 3910529 (-) False LOC103042532
XM_022671977.1 mRNA upstream 150981 3862118 ~ 3910529 (-) True LOC103042532
XM_007236447.3 mRNA upstream 736035 4447172 ~ 4462972 (-) True LOC103026470
XM_022671989.1 mRNA upstream 1246968 4958105 ~ 5013867 (-) True LOC103041488
TU95670 other downstream 336716 3347800 ~ 3353599 (-) True G70924
TU95334 other downstream 945243 2735868 ~ 2745072 (-) False tnip1
TU95798 other upstream 58024 3769161 ~ 3807099 (-) False LOC103042226
TU96020 other upstream 700811 4411948 ~ 4413011 (-) True G71175
TU96095 other upstream 1171033 4882170 ~ 4884488 (-) True G71235
trnaw-cca_42 other upstream 1212863 4924000 ~ 4924071 (-) True trnaw-cca_42
TU96400 other upstream 1760529 5471666 ~ 5476375 (-) True G71458

Expression Profile