Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU96107 |
| length | 709 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G71244 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035904.1 |
| NCBI id | CM008307.1 |
| chromosome length | 27092187 |
| location | 4941409 ~ 4942117 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU96100 | lncRNA | upstream | 19589 | 4915813 ~ 4921820 (+) | True | atpif1 |
| TU96070 | lncRNA | upstream | 97196 | 4744153 ~ 4844213 (+) | True | G71215 |
| TU96062 | lncRNA | upstream | 262687 | 4678331 ~ 4678722 (+) | True | G71209 |
| TU96054 | lncRNA | upstream | 319169 | 4621818 ~ 4622240 (+) | True | G71201 |
| TU96047 | lncRNA | upstream | 430012 | 4510801 ~ 4511397 (+) | True | G71194 |
| TU96119 | lncRNA | downstream | 16039 | 4958156 ~ 5006225 (+) | True | G71248 |
| TU96110 | lncRNA | downstream | 21854 | 4963971 ~ 4968919 (+) | True | G71246 |
| TU96132 | lncRNA | downstream | 48735 | 4990852 ~ 4993179 (+) | True | G71256 |
| TU96138 | lncRNA | downstream | 58974 | 5001091 ~ 5043758 (+) | True | G71260 |
| TU96175 | lncRNA | downstream | 191618 | 5133735 ~ 5137567 (+) | True | G71287 |
| XM_007239845.3 | mRNA | upstream | 6344 | 4929177 ~ 4935065 (+) | True | hnrnpr |
| XM_015603236.2 | mRNA | upstream | 6344 | 4929181 ~ 4935065 (+) | False | hnrnpr |
| XM_007239846.3 | mRNA | upstream | 6344 | 4929183 ~ 4935065 (+) | False | hnrnpr |
| XM_007239844.3 | mRNA | upstream | 19590 | 4915821 ~ 4921819 (+) | False | atpif1 |
| XM_015603237.2 | mRNA | upstream | 56921 | 4857848 ~ 4884488 (+) | True | LOC103029142 |
| XM_007239848.3 | mRNA | downstream | 1089 | 4943206 ~ 4954889 (+) | True | dnajc8 |
| XM_022671992.1 | mRNA | downstream | 106389 | 5048506 ~ 5067507 (+) | True | cfap69 |
| XM_022671993.1 | mRNA | downstream | 126784 | 5068901 ~ 5082606 (+) | True | LOC103041177 |
| XM_007253633.2 | mRNA | downstream | 149761 | 5091878 ~ 5117839 (+) | True | LOC103040455 |
| XM_007253634.2 | mRNA | downstream | 149764 | 5091881 ~ 5112015 (+) | False | LOC103040455 |
| TU95569 | other | upstream | 1366651 | 3412451 ~ 3574758 (+) | False | LOC111193071 |
| TU95561 | other | upstream | 1562799 | 3377684 ~ 3378610 (+) | True | G70846 |
| TU95246 | other | upstream | 2582180 | 2358883 ~ 2359229 (+) | True | G70604 |
| TU95147 | other | upstream | 3672005 | 1268767 ~ 1269404 (+) | True | G70522 |
| TU94981 | other | upstream | 3935571 | 1005483 ~ 1005838 (+) | True | G70385 |
| LOC111193076 | other | downstream | 14162 | 4956279 ~ 4957026 (+) | True | LOC111193076 |
| TU96113 | other | downstream | 14181 | 4956298 ~ 4980011 (+) | True | G71247 |
| TU96114 | other | downstream | 14181 | 4956298 ~ 4980011 (+) | False | G71247 |
| TU96122 | other | downstream | 21585 | 4963702 ~ 4967907 (+) | True | G71249 |
| LOC111193046 | other | downstream | 37350 | 4979467 ~ 4980022 (+) | True | LOC111193046 |
