Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU96448 |
| length | 686 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 5 |
| gene id | G71496 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035904.1 |
| NCBI id | CM008307.1 |
| chromosome length | 27092187 |
| location | 5642890 ~ 5678873 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU96437 | lncRNA | downstream | 42938 | 5599714 ~ 5599952 (-) | True | G71488 |
| TU96415 | lncRNA | downstream | 115016 | 5527659 ~ 5527874 (-) | True | G71472 |
| TU96407 | lncRNA | downstream | 150949 | 5490363 ~ 5491941 (-) | True | G71464 |
| TU96332 | lncRNA | downstream | 319248 | 5323344 ~ 5323642 (-) | True | G71396 |
| TU96295 | lncRNA | downstream | 412076 | 5156618 ~ 5230814 (-) | True | G71361 |
| TU96453 | lncRNA | upstream | 932 | 5679805 ~ 5680110 (-) | True | G71501 |
| TU96531 | lncRNA | upstream | 187432 | 5866305 ~ 5866528 (-) | True | G71554 |
| TU96568 | lncRNA | upstream | 275747 | 5954620 ~ 5967921 (-) | True | G71577 |
| TU96623 | lncRNA | upstream | 407966 | 6086839 ~ 6087111 (-) | True | G71612 |
| TU96669 | lncRNA | upstream | 475018 | 6153891 ~ 6178020 (-) | True | G71636 |
| XM_022672001.1 | mRNA | downstream | 46865 | 5531871 ~ 5596025 (-) | True | trpc3 |
| XM_022672005.1 | mRNA | downstream | 46887 | 5531871 ~ 5596003 (-) | False | trpc3 |
| XM_022672004.1 | mRNA | downstream | 46943 | 5531871 ~ 5595947 (-) | False | trpc3 |
| XM_022672003.1 | mRNA | downstream | 46943 | 5531871 ~ 5595947 (-) | False | trpc3 |
| XM_022672002.1 | mRNA | downstream | 56709 | 5531871 ~ 5586181 (-) | False | trpc3 |
| XM_022672006.1 | mRNA | upstream | 91914 | 5770787 ~ 5800724 (-) | False | LOC103036182 |
| XM_007253618.3 | mRNA | upstream | 91914 | 5770787 ~ 5798674 (-) | True | LOC103036182 |
| XM_022672007.1 | mRNA | upstream | 91914 | 5770787 ~ 5796092 (-) | False | LOC103036182 |
| XM_007253619.3 | mRNA | upstream | 91914 | 5770787 ~ 5796092 (-) | False | LOC103036182 |
| XM_007253616.3 | mRNA | upstream | 151216 | 5830089 ~ 5841707 (-) | False | LOC103035656 |
| TU96400 | other | downstream | 166515 | 5471666 ~ 5476375 (-) | True | G71458 |
| trnaw-cca_42 | other | downstream | 718819 | 4924000 ~ 4924071 (-) | True | trnaw-cca_42 |
| TU96095 | other | downstream | 758402 | 4882170 ~ 4884488 (-) | True | G71235 |
| TU96020 | other | downstream | 1229879 | 4411948 ~ 4413011 (-) | True | G71175 |
| TU95798 | other | downstream | 1835791 | 3769161 ~ 3807099 (-) | False | LOC103042226 |
| TU96529 | other | upstream | 150748 | 5829621 ~ 5841687 (-) | True | LOC103035656 |
| TU96859 | other | upstream | 1098366 | 6777239 ~ 6824756 (-) | True | G71771 |
| TU96917 | other | upstream | 1378237 | 7057110 ~ 7057643 (-) | True | G71826 |
| TU96981 | other | upstream | 1630902 | 7309775 ~ 7312926 (-) | True | G71862 |
| TU97555 | other | upstream | 2960665 | 8639538 ~ 8645601 (-) | True | G72336 |
