Item | Value |
---|---|
RNA id | TU96648 |
length | 482 |
lncRNA type | inter_gene |
GC content | 0.36 |
exon number | 1 |
gene id | G71628 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_035904.1 |
NCBI id | CM008307.1 |
chromosome length | 27092187 |
location | 6345234 ~ 6345715 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
species | mexican tetra (Astyanax mexicanus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU96624 | lncRNA | upstream | 187816 | 6153881 ~ 6157418 (+) | True | G71613 |
TU96622 | lncRNA | upstream | 258247 | 6086574 ~ 6086987 (+) | True | G71611 |
TU96619 | lncRNA | upstream | 308575 | 6032185 ~ 6036659 (+) | True | G71608 |
TU96551 | lncRNA | upstream | 327131 | 5966554 ~ 6018103 (+) | True | G71567 |
TU96550 | lncRNA | upstream | 330852 | 6012222 ~ 6014382 (+) | True | G71566 |
TU96785 | lncRNA | downstream | 293951 | 6639666 ~ 6661997 (+) | True | LOC111193077 |
TU96786 | lncRNA | downstream | 310845 | 6656560 ~ 6661997 (+) | False | LOC111193077 |
XR_002650233.1 | lncRNA | downstream | 310965 | 6656680 ~ 6662003 (+) | False | LOC111193077 |
TU96826 | lncRNA | downstream | 521333 | 6867048 ~ 6868404 (+) | True | G71747 |
TU96876 | lncRNA | downstream | 526433 | 6872148 ~ 6872364 (+) | True | G71787 |
XM_022672014.1 | mRNA | upstream | 536 | 6318320 ~ 6344698 (+) | True | trappc11 |
XM_022672015.1 | mRNA | upstream | 536 | 6318330 ~ 6344698 (+) | False | trappc11 |
XM_007253600.3 | mRNA | upstream | 53850 | 6272216 ~ 6291384 (+) | True | LOC103031423 |
XM_007253601.3 | mRNA | upstream | 333833 | 6008561 ~ 6011401 (+) | True | LOC103031741 |
XM_022672012.1 | mRNA | upstream | 357468 | 5962280 ~ 5987766 (+) | True | tmem173 |
XM_007253596.3 | mRNA | downstream | 7924 | 6353639 ~ 6372363 (+) | True | LOC103029834 |
XM_007253595.3 | mRNA | downstream | 7927 | 6353642 ~ 6372363 (+) | False | LOC103029834 |
XM_007253591.3 | mRNA | downstream | 28834 | 6374549 ~ 6462450 (+) | False | LOC103028894 |
XM_022672017.1 | mRNA | downstream | 28889 | 6374604 ~ 6462450 (+) | False | LOC103028894 |
XM_007253592.3 | mRNA | downstream | 61739 | 6407454 ~ 6462450 (+) | True | LOC103028894 |
trnaa-agc_15 | other | upstream | 307486 | 6037676 ~ 6037748 (+) | True | trnaa-agc_15 |
trnaa-agc_14 | other | upstream | 308360 | 6036802 ~ 6036874 (+) | True | trnaa-agc_14 |
TU96351 | other | upstream | 839596 | 5499908 ~ 5505638 (+) | True | G71414 |
LOC111193046 | other | upstream | 1365212 | 4979467 ~ 4980022 (+) | True | LOC111193046 |
TU96122 | other | upstream | 1377327 | 4963702 ~ 4967907 (+) | True | G71249 |
TU96736 | other | downstream | 179926 | 6525641 ~ 6538794 (+) | True | G71682 |
TU96877 | other | downstream | 535872 | 6881587 ~ 6885541 (+) | True | G71788 |
TU97487 | other | downstream | 2797184 | 9142899 ~ 9149419 (+) | True | G72281 |
TU97933 | other | downstream | 3732864 | 10078579 ~ 10082140 (+) | True | G72621 |
trnar-ucg_4 | other | downstream | 6257637 | 12603352 ~ 12603424 (+) | True | trnar-ucg_4 |