Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU96786 |
| length | 1104 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 5 |
| gene id | LOC111193077 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035904.1 |
| NCBI id | CM008307.1 |
| chromosome length | 27092187 |
| location | 6639666 ~ 6662003 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU96648 | lncRNA | upstream | 310845 | 6345234 ~ 6345715 (+) | True | G71628 |
| TU96624 | lncRNA | upstream | 499142 | 6153881 ~ 6157418 (+) | True | G71613 |
| TU96622 | lncRNA | upstream | 569573 | 6086574 ~ 6086987 (+) | True | G71611 |
| TU96619 | lncRNA | upstream | 619901 | 6032185 ~ 6036659 (+) | True | G71608 |
| TU96550 | lncRNA | upstream | 642178 | 6012222 ~ 6014382 (+) | True | G71566 |
| TU96826 | lncRNA | downstream | 205051 | 6867048 ~ 6868404 (+) | True | G71747 |
| TU96876 | lncRNA | downstream | 210151 | 6872148 ~ 6872364 (+) | True | G71787 |
| TU96898 | lncRNA | downstream | 391026 | 7053023 ~ 7053324 (+) | True | G71808 |
| TU96900 | lncRNA | downstream | 395737 | 7057734 ~ 7058275 (+) | True | G71810 |
| TU96894 | lncRNA | downstream | 399695 | 7061692 ~ 7100725 (+) | True | G71805 |
| XM_022672027.1 | mRNA | upstream | 22685 | 6605304 ~ 6633875 (+) | False | LOC103026234 |
| XM_022672028.1 | mRNA | upstream | 22685 | 6608340 ~ 6633875 (+) | True | LOC103026234 |
| XM_007253586.3 | mRNA | upstream | 96825 | 6541416 ~ 6559735 (+) | True | LOC103027224 |
| XM_022672024.1 | mRNA | upstream | 136089 | 6509961 ~ 6520471 (+) | True | LOC103042719 |
| XM_022672020.1 | mRNA | upstream | 147542 | 6487253 ~ 6509018 (+) | True | LOC103043030 |
| XM_022672030.1 | mRNA | downstream | 16599 | 6678596 ~ 6719028 (+) | True | LOC103042411 |
| XM_007253581.3 | mRNA | downstream | 271393 | 6933390 ~ 6940362 (+) | True | bnip1 |
| XM_007253575.3 | mRNA | downstream | 477039 | 7139036 ~ 7173548 (+) | True | LOC103023840 |
| XM_007253577.3 | mRNA | downstream | 477039 | 7139036 ~ 7173548 (+) | False | LOC103023840 |
| XM_022672032.1 | mRNA | downstream | 477039 | 7139036 ~ 7173548 (+) | False | LOC103023840 |
| TU96736 | other | upstream | 117766 | 6525641 ~ 6538794 (+) | True | G71682 |
| trnaa-agc_15 | other | upstream | 618812 | 6037676 ~ 6037748 (+) | True | trnaa-agc_15 |
| trnaa-agc_14 | other | upstream | 619686 | 6036802 ~ 6036874 (+) | True | trnaa-agc_14 |
| TU96351 | other | upstream | 1150922 | 5499908 ~ 5505638 (+) | True | G71414 |
| LOC111193046 | other | upstream | 1676538 | 4979467 ~ 4980022 (+) | True | LOC111193046 |
| TU96877 | other | downstream | 219590 | 6881587 ~ 6885541 (+) | True | G71788 |
| TU97487 | other | downstream | 2480902 | 9142899 ~ 9149419 (+) | True | G72281 |
| TU97933 | other | downstream | 3416582 | 10078579 ~ 10082140 (+) | True | G72621 |
| trnar-ucg_4 | other | downstream | 5941355 | 12603352 ~ 12603424 (+) | True | trnar-ucg_4 |
| XR_002650241.1 | other | downstream | 6209487 | 12871484 ~ 12897931 (+) | False | LOC103043719 |
