RNA id: TU96859



Basic Information


Item Value
RNA id TU96859
length 305
RNA type TUCP
GC content 0.59
exon number 2
gene id G71771
representative True

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 6777239 ~ 6824756 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


TGTTAAGCGGGATCCCGCGTTCGTGCTGCGTTGTTTACCTGGATGACGTCATGGCGCACGGGACCGACTTCGACTCCGCGCTCTCTCACCTCGAGGTGGTGCTCGGCGCGATTCAGGCGGCTAACCTGAAGCTCAACCCGGCGAAGTGTAACCTGCTGAGGCAGCGCGTGAATTTTCTGGGCCATGTAGTGAGCGGTGCTGGTGTGGAAACCGACCCTAAAAAGACGGAGGCTGTCCGTGACTGGCCTGTCCCACGTAACGCGAAAATGGTTCGTAGTTTCGTGGGGCTCGCATCTGTATCCACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU96836 lncRNA downstream 44650 6714141 ~ 6732589 (-) True G71755
TU96776 lncRNA downstream 143590 6627067 ~ 6633649 (-) True G71712
TU96771 lncRNA downstream 164294 6605271 ~ 6612945 (-) True G71708
TU96767 lncRNA downstream 211124 6561124 ~ 6566115 (-) True G71704
TU96758 lncRNA downstream 278941 6493631 ~ 6498298 (-) True G71697
TU96879 lncRNA upstream 56776 6881532 ~ 6885591 (-) True G71790
TU96882 lncRNA upstream 86658 6911414 ~ 6911709 (-) True G71793
TU96907 lncRNA upstream 111042 6935798 ~ 6936080 (-) True G71817
TU96913 lncRNA upstream 158047 6982803 ~ 6983003 (-) True G71822
TU96916 lncRNA upstream 228142 7052898 ~ 7053319 (-) True G71825
XM_007253585.3 mRNA downstream 184115 6585674 ~ 6593124 (-) True LOC103026932
XM_007253587.2 mRNA downstream 193497 6570816 ~ 6583742 (-) True LOC103027842
XM_022672025.1 mRNA downstream 238457 6522057 ~ 6538782 (-) True LOC103036141
XM_022672026.1 mRNA downstream 238458 6522057 ~ 6538781 (-) False LOC103036141
XM_007253597.3 mRNA downstream 461398 6293684 ~ 6315841 (-) True hars
XM_007253582.3 mRNA upstream 39268 6864024 ~ 6868262 (-) True LOC103025929
XM_007253580.3 mRNA upstream 124820 6949576 ~ 6956193 (-) True LOC103025318
XM_007253579.3 mRNA upstream 160462 6985218 ~ 7006934 (-) True LOC103024994
XM_007253573.2 mRNA upstream 436225 7260981 ~ 7265921 (-) True LOC103022894
XM_007258580.3 mRNA upstream 599927 7424683 ~ 7444873 (-) False kif3a
TU96529 other downstream 935552 5829621 ~ 5841687 (-) True LOC103035656
TU96400 other downstream 1300864 5471666 ~ 5476375 (-) True G71458
trnaw-cca_42 other downstream 1853168 4924000 ~ 4924071 (-) True trnaw-cca_42
TU96095 other downstream 1892751 4882170 ~ 4884488 (-) True G71235
TU96020 other downstream 2364228 4411948 ~ 4413011 (-) True G71175
TU96917 other upstream 232354 7057110 ~ 7057643 (-) True G71826
TU96981 other upstream 485019 7309775 ~ 7312926 (-) True G71862
TU97555 other upstream 1814782 8639538 ~ 8645601 (-) True G72336
TU97699 other upstream 2341122 9165878 ~ 9174309 (-) True G72449
TU97707 other upstream 2397936 9222692 ~ 9225559 (-) True G72453

Expression Profile