RNA id: TU96907



Basic Information


Item Value
RNA id TU96907
length 203
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G71817
representative True

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 6935798 ~ 6936080 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


CTAAGCATCTGTTTACGATGGGCCTCCACCTCTTTGAGTAAGACCTGCTTATCCGATTCCTTATCCTGCTCCTTACCCATCTGCTCCAGATCCTGTTGAGACAGgtgCTGTATCCTCTGCCGGAGACGGCTGAACCTTTCCTTCACTTTGCAGTTCAGCTCAGTCAGTTCATTGTGTGGACCTGTGCACTCACTGATAtcctg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU96882 lncRNA downstream 24089 6911414 ~ 6911709 (-) True G71793
TU96879 lncRNA downstream 50207 6881532 ~ 6885591 (-) True G71790
TU96852 lncRNA downstream 72506 6755432 ~ 6863292 (-) True G71766
TU96851 lncRNA downstream 72506 6787520 ~ 6863292 (-) False G71766
TU96836 lncRNA downstream 203209 6714141 ~ 6732589 (-) True G71755
TU96913 lncRNA upstream 46723 6982803 ~ 6983003 (-) True G71822
TU96916 lncRNA upstream 116818 7052898 ~ 7053319 (-) True G71825
TU96941 lncRNA upstream 194671 7130751 ~ 7172911 (-) True G71839
TU96942 lncRNA upstream 194671 7130751 ~ 7175962 (-) False G71839
TU96949 lncRNA upstream 229052 7165132 ~ 7181452 (-) True G71845
XM_007253582.3 mRNA downstream 67536 6864024 ~ 6868262 (-) True LOC103025929
XM_007253585.3 mRNA downstream 342674 6585674 ~ 6593124 (-) True LOC103026932
XM_007253587.2 mRNA downstream 352056 6570816 ~ 6583742 (-) True LOC103027842
XM_022672025.1 mRNA downstream 397016 6522057 ~ 6538782 (-) True LOC103036141
XM_007253580.3 mRNA upstream 13496 6949576 ~ 6956193 (-) True LOC103025318
XM_007253579.3 mRNA upstream 49138 6985218 ~ 7006934 (-) True LOC103024994
XM_007253573.2 mRNA upstream 324901 7260981 ~ 7265921 (-) True LOC103022894
XM_007258580.3 mRNA upstream 488603 7424683 ~ 7444873 (-) False kif3a
XM_022672035.1 mRNA upstream 488603 7424683 ~ 7444873 (-) True kif3a
TU96859 other downstream 111042 6777239 ~ 6824756 (-) True G71771
TU96529 other downstream 1094111 5829621 ~ 5841687 (-) True LOC103035656
TU96400 other downstream 1459423 5471666 ~ 5476375 (-) True G71458
trnaw-cca_42 other downstream 2011727 4924000 ~ 4924071 (-) True trnaw-cca_42
TU96095 other downstream 2051310 4882170 ~ 4884488 (-) True G71235
TU96917 other upstream 121030 7057110 ~ 7057643 (-) True G71826
TU96981 other upstream 373695 7309775 ~ 7312926 (-) True G71862
TU97555 other upstream 1703458 8639538 ~ 8645601 (-) True G72336
TU97699 other upstream 2229798 9165878 ~ 9174309 (-) True G72449
TU97707 other upstream 2286612 9222692 ~ 9225559 (-) True G72453

Expression Profile