RNA id: TU97047



Basic Information


Item Value
RNA id TU97047
length 210
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G71914
representative True

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 7521532 ~ 7521741 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


acaatcgcctacaaggtgatgacagaacaggctccttcctacctgcactcgctcctgaaggcttacgctacctcccggccgctgcgctcctccaatgaacatcgcctcgctttaccaaacattcacacaaagcaatccagactgttctcatacagtgTTCCCCAATGGaggaacaaactaccctccactaccagatcaggagaatctctc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97044 lncRNA downstream 23049 7497781 ~ 7498483 (-) True G71911
TU97033 lncRNA downstream 178098 7343234 ~ 7343434 (-) True G71900
XR_002650220.1 lncRNA downstream 219224 7301826 ~ 7302308 (-) True LOC111193041
TU96949 lncRNA downstream 340080 7165132 ~ 7181452 (-) True G71845
TU96942 lncRNA downstream 345570 7130751 ~ 7175962 (-) False G71839
TU97104 lncRNA upstream 29444 7551185 ~ 7554641 (-) True LOC103027657
TU97123 lncRNA upstream 134921 7656662 ~ 7666552 (-) True G71975
TU97180 lncRNA upstream 252154 7773895 ~ 7775441 (-) False LOC103030515
TU97187 lncRNA upstream 356938 7878679 ~ 7879316 (-) True G72022
TU97188 lncRNA upstream 403653 7925394 ~ 7929086 (-) True G72023
XM_022672037.1 mRNA downstream 34894 7446578 ~ 7486638 (-) False LOC103030823
XM_007258588.3 mRNA downstream 35118 7446578 ~ 7486414 (-) True LOC103030823
XM_022672035.1 mRNA downstream 76659 7424683 ~ 7444873 (-) True kif3a
XM_022672038.1 mRNA upstream 31715 7553456 ~ 7590554 (-) False LOC103027657
XM_022671906.1 mRNA upstream 45659 7567400 ~ 7588582 (-) True LOC111193047
XM_007258577.3 mRNA upstream 154546 7676287 ~ 7685366 (-) True LOC103026574
XM_007258575.3 mRNA upstream 168444 7690185 ~ 7696908 (-) True LOC103026262
XM_007258574.3 mRNA upstream 178149 7699890 ~ 7719056 (-) True LOC103025952
TU96981 other downstream 208606 7309775 ~ 7312926 (-) True G71862
TU96917 other downstream 463889 7057110 ~ 7057643 (-) True G71826
TU96859 other downstream 696776 6777239 ~ 6824756 (-) True G71771
TU96529 other downstream 1679845 5829621 ~ 5841687 (-) True LOC103035656
TU96400 other downstream 2045157 5471666 ~ 5476375 (-) True G71458
TU97555 other upstream 1117797 8639538 ~ 8645601 (-) True G72336
TU97699 other upstream 1644137 9165878 ~ 9174309 (-) True G72449
TU97707 other upstream 1700951 9222692 ~ 9225559 (-) True G72453
TU98300 other upstream 3999146 11520887 ~ 11545223 (-) False LOC111193052
TU98292 other upstream 3999271 11521012 ~ 11545136 (-) False LOC111193052

Expression Profile