RNA id: TU97547



Basic Information


Item Value
RNA id TU97547
length 278
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G72329
representative True

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 8483358 ~ 8497873 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


caacaattcaagcagttcagtttggtttgacaggcccgtagccagcattgtgatgggggggatctttttcccccaaaagtggacttcatttggctctctactccaatgccccctaaatacacgagcacacttcaaaccttttaatttagacatattttattcattataagtttgttgtgaatctgttgttgctgtccttatttgttcatctgttgctccccactgttaacataaattttatataaatgtaagtgttactcaaacttcctacatctgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97534 lncRNA downstream 40632 8441765 ~ 8442726 (-) True G72317
TU97532 lncRNA downstream 82114 8400868 ~ 8401244 (-) True G72315
TU97529 lncRNA downstream 106773 8376087 ~ 8376585 (-) True G72312
TU97286 lncRNA downstream 166381 8316651 ~ 8316977 (-) True G72118
TU97188 lncRNA downstream 554272 7925394 ~ 7929086 (-) True G72023
TU97557 lncRNA upstream 166882 8664755 ~ 8687466 (-) True G72338
TU97560 lncRNA upstream 166882 8664755 ~ 8666837 (-) False G72338
TU97559 lncRNA upstream 183495 8681368 ~ 8682591 (-) False G72338
TU97562 lncRNA upstream 185350 8683223 ~ 8782160 (-) False G72338
TU97569 lncRNA upstream 204010 8701883 ~ 8702315 (-) True G72345
XM_022672042.1 mRNA downstream 308464 7867201 ~ 8174894 (-) False enox2
XM_022672041.1 mRNA downstream 308464 7867201 ~ 8174894 (-) False enox2
XM_007258567.3 mRNA downstream 326641 7867201 ~ 8156717 (-) True enox2
XM_022672040.1 mRNA downstream 641078 7775386 ~ 7842280 (-) True LOC103030515
XM_022671907.1 mRNA downstream 714997 7726618 ~ 7768361 (-) True med12
XM_007227997.3 mRNA upstream 237204 8735077 ~ 8758128 (-) True LOC103029481
XM_007227996.3 mRNA upstream 237205 8735078 ~ 8758126 (-) False LOC103029481
XM_022672092.1 mRNA upstream 754993 9252866 ~ 9276501 (-) True mfsd7
XM_022672091.1 mRNA upstream 754993 9252866 ~ 9268345 (-) False mfsd7
XM_007228031.3 mRNA upstream 1047065 9544938 ~ 9625510 (-) True cplx1
TU96981 other downstream 1170432 7309775 ~ 7312926 (-) True G71862
TU96917 other downstream 1425715 7057110 ~ 7057643 (-) True G71826
TU96859 other downstream 1658602 6777239 ~ 6824756 (-) True G71771
TU96529 other downstream 2641671 5829621 ~ 5841687 (-) True LOC103035656
TU96400 other downstream 3006983 5471666 ~ 5476375 (-) True G71458
TU97555 other upstream 141665 8639538 ~ 8645601 (-) True G72336
TU97699 other upstream 668005 9165878 ~ 9174309 (-) True G72449
TU97707 other upstream 724819 9222692 ~ 9225559 (-) True G72453
TU98300 other upstream 3023014 11520887 ~ 11545223 (-) False LOC111193052
TU98292 other upstream 3023139 11521012 ~ 11545136 (-) False LOC111193052

Expression Profile