RNA id: TU99167


Basic Information

Item Value
RNA id TU99167
length 1592
lncRNA type inter_gene
GC content 0.50
exon number 8
gene id G73540
representative False

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14597951 ~ 14605960 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ACATtgacagttgaattgctttaTTTCATCCCCTTTAGTCAACAAATATCCAGACAATGCACATTTGTGCTCTGAGTGTGGAGTGTGATGTTCATAATACTACAGACACTGACCATCAGGGTCCCTTGCATTAATCGCTAAATAAATTCTCTATAATCAGGACATAAATGTGCAAAATGACATCTAGACAGGAAAGAAAAGGACAGCTTCACATATTTCCACATGATCTTTTAATCATTCTATTGACAAACATACTTAAAACCAGGTGGCATTCATTCACGTCATAGTTTAACTGAACTTCCACTGGAAGCTCCTCTCACCACACAGATGGAAGAGACGAGCAGCAGCCAGGTGAGCAACAGGGCAGCCGTGAGAgtttaaatatagaaaacagGAGGGAAGTTTGCTATTAAGGGATGGGAGGGGTGAGCAGAGATGATCTCTACTCGCTGAGACCCAGCTTCTTCTTCAGAGACTCTGGCATCTCGGGGGGAGGGGGACGGGGCAGGCGGAAGTAGACCTTGACAGAATCGTAGATGAACCACTGCAGGGCAGTCAGAGTACCAATCATGATGATACGGGCAACCAGACCCTTCCACACACATGGGTCCAAGCCTCTTGAGTACTTGAGCTGCTGTGCTTCCCTTCTCCTTGTTCAGCAATGTAACCAGCTACAAAGGTGACCAAAAGCTGTTCAGGCTTGCTGCACTCACTGCGGGGTTTGGGCACCACATACTTGTATAGCAATTCAACTGTGCGCTCGAAACAGGCAAACTTCATCATAGTGTAAGGGATCTGCCTCATCCACAGAGGGACAACACCCTTGTAGAATGCCCAGAGACCCTCCTCCGCATACATCTTGGGGGCACACTCCCTCAGGGTGTTGGCATAACCTGGCTGGGTCTGGATGCGCACTTTACACGCCTCCATAGGGGCCAGAGCTATATCAGCAAAGAACTCAGCACTTGCAGATGCTGCCAGGTACAGAGAGGTTCTCCACATGTAGGTATTCCTCTCCAAGCATATCACTGTACAATATCTTGAACACCTCATAGAATCCGAACTTGCAGAGACCCTGCATGGAGTAGCCGATGAAAGTGGGTGCCCAACCTTTAGCCAGGCCTCGCACACCATCCTCTTTGATTGTGACTGAGAATCCAGTAAAGATGCTCTTGTACTTAGCTGGGTCCACCTGCAGTCGACACTTGACCAAGTCCAGGGGCACTACAGCTGTGTGAGTGATACCGCAGCTCAGGATGCCCCCAAAGCCACAGAGGGCGTAGTATTTCATAGAGCCAAACTCACAGCTATCACCTGTCGGCTGTAGAAGCTGCAGCGAGTCTGCGGCTCTGTGCTTTAGTGGAGACGGTCTGTGAGGGCTCCTCCACTTTCTGCAGGGTGAAGAGGGGGGCGCTGAAGGGGTTCGCCCGGGCGAGCTGCGTTAATGTGGTGGGATACATATTGAAGGTAGTTGTTAAGGTCGACTCAAAATGGCGCCTCTGTCCTCCGCAGCCGGCCGCTCGTAGAGACCGAGGAGAGCTCTGCGCTCACTAATGTCGGAGGAAGGAGACCGCAACGTCAACGGAACAGCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99124 lncRNA downstream 129810 14467622 ~ 14468141 (-) True G73509
TU99102 lncRNA downstream 320845 14276679 ~ 14277106 (-) True G73491
TU99032 lncRNA downstream 525913 14070499 ~ 14072038 (-) True G73434
TU99030 lncRNA downstream 559583 14038069 ~ 14038368 (-) True G73432
TU99027 lncRNA downstream 590802 14006752 ~ 14007149 (-) True G73429
TU99251 lncRNA upstream 69921 14675881 ~ 14676858 (-) True G73606
TU99248 lncRNA upstream 103101 14709061 ~ 14797283 (-) False hbp1
TU99266 lncRNA upstream 139210 14745170 ~ 14748658 (-) True G73617
TU99272 lncRNA upstream 150939 14756899 ~ 14757248 (-) True G73622
TU99250 lncRNA upstream 191395 14797355 ~ 14800633 (-) True G73605
XM_007228304.2 mRNA downstream 19433 14574795 ~ 14578518 (-) True LOC103041151
XM_022672170.1 mRNA downstream 23730 14566910 ~ 14574221 (-) True LOC103040849
XM_007228164.3 mRNA downstream 42996 14550872 ~ 14554955 (-) True cib1
XM_007228165.2 mRNA downstream 52415 14542196 ~ 14545536 (-) True LOC103025073
XM_022672168.1 mRNA downstream 137563 14390685 ~ 14460388 (-) True LOC103024229
XM_007228175.2 mRNA upstream 8431 14614391 ~ 14619388 (-) False LOC103028140
XM_007228176.3 mRNA upstream 8431 14614391 ~ 14619171 (-) True LOC103028140
XM_007228172.3 mRNA upstream 34041 14640001 ~ 14649251 (-) True gpr22
XM_022671917.1 mRNA upstream 81729 14687689 ~ 14690107 (-) True LOC111193055
XM_007228180.3 mRNA upstream 103098 14709058 ~ 14717691 (-) False hbp1
TU99163 other downstream 52513 14542209 ~ 14545438 (-) False LOC103025073
TU98709 other downstream 1976595 12610834 ~ 12621356 (-) True G73172
TU98667 other downstream 2032985 12564348 ~ 12564966 (-) False fbxo31
TU98668 other downstream 2033077 12564348 ~ 12564874 (-) False fbxo31
TU98666 other downstream 2033153 12564348 ~ 12564798 (-) False fbxo31
XR_002650248.1 other upstream 1155804 15761764 ~ 15778423 (-) False LOC103046265
TU100463 other upstream 3271066 17877026 ~ 17883786 (-) False nrg4
TU100498 other upstream 3376787 17982747 ~ 18029747 (-) True G74591
TU100745 other upstream 4333214 18939174 ~ 18940464 (-) True G74791
TU100809 other upstream 4464978 19070938 ~ 19072888 (-) True G74838

Expression Profile